RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 SEPT7Q16181 437 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 RAPH1Q70E73 1250 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 MICALL2Q8IY33 904 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 MTMR14Q8NCE2 650 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 TTC25Q96NG3 672 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 C10orf88Q9H8K7 445 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 PGAP2Q9UHJ9 254 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ZNF148Q9UQR1 794 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 PTPRJQ12913 1337 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 COL4A5P29400 1685 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 RGS20O76081 388 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ENO1P06733 434 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 CDK7P50613 346 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 CENPCQ03188 943 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 LSAMPQ13449 338 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ZRSR2Q15696 482 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 GSTA3Q16772 222 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 TMEM132AQ24JP5 1023 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 XKR3Q5GH77 459 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ZNF772Q68DY9 489 aaPredicted RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 DCUN1D2Q6PH85 259 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 EEPD1Q7L9B9 569 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 SESTD1Q86VW0 696 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 RHOT1Q8IXI2 618 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ZNF280CQ8ND82 737 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 RBM15BQ8NDT2 890 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 CHCHD3Q9NX63 227 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 PSMC3IPQ9P2W1 217 aaPredicted RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 DNALI1O14645 258 aaPredicted RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 PEX10O60683 326 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 PROSCO94903 275 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 IFNB1P01574 187 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 BGNP21810 368 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 SLC1A1P43005 524 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ZACNQ401N2 412 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 ZNF398Q8TD17 642 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 HAPLN3Q96S86 360 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 MRPL47Q9HD33 250 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
USP48-213ENST00000529637 ATXN10Q9UBB4 475 aa14.85□□□□□ -0.03
USP48-213ENST00000529637 LOXHD1Q8IVV2 1947 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 CLUHO75153 1309 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 H0YCG3 227 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 USP46P62068 366 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 KDSRQ06136 332 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 RASA2Q15283 850 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 HSF5Q4G112 596 aaPredicted RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 MSS51Q4VC12 460 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 SCARA5Q6ZMJ2 495 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 NMD3Q96D46 503 aaKnown RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 DNAJC1Q96KC8 554 aaKnown RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 ZNF302Q9NR11 478 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 SENP1Q9P0U3 644 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 RABGEF1Q9UJ41 708 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 CCDC142Q17RM4 750 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 SATL1Q86VE3 508 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 BBOF1Q8ND07 529 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 OR5B17Q8NGF7 314 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 CFAP61Q8NHU2 1237 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 OXNAD1Q96HP4 312 aaPredicted RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 CDHR1Q96JP9 859 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 THTPAQ9BU02 230 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 VCX3BQ9H321 246 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 ZNF395Q9H8N7 513 aaPredicted RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 APOBEC3GQ9HC16 384 aaKnown RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 VCX3AQ9NNX9 186 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 AVENQ9NQS1 362 aaPredicted RBP14.84□□□□□ -0.03
USP48-213ENST00000529637 ARHGAP28Q9P2N2 729 aa14.84□□□□□ -0.03
USP48-213ENST00000529637 HNRNPRO43390 633 aaKnown RBP14.83□□□□□ -0.03
USP48-213ENST00000529637 LMNB2Q03252 620 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 TTLL12Q14166 644 aaPredicted RBP14.83□□□□□ -0.03
USP48-213ENST00000529637 TMEM132BQ14DG7 1078 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 PSMD6Q15008 389 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 TMEM174Q8WUU8 243 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 TTC17Q96AE7 1141 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 PHACTR1Q9C0D0 580 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 CLIC5Q9NZA1 410 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 SLC7A8Q9UHI5 535 aa14.83□□□□□ -0.03
USP48-213ENST00000529637 MAFGO15525 162 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 ZC3H11AO75152 810 aaKnown RBP eCLIP14.83□□□□□ -0.04
USP48-213ENST00000529637 STK10O94804 968 aaKnown RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 KRT1P04264 644 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 GMPSP49915 693 aaPredicted RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 RPL7AP62424 266 aaKnown RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 MAP3K10Q02779 954 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 NCOA4Q13772 614 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 RNF111Q6ZNA4 994 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 MARK2Q7KZI7 788 aaKnown RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 BANPQ8N9N5 519 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 MZB1Q8WU39 189 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 WDR83Q9BRX9 315 aaKnown RBP14.83□□□□□ -0.04
USP48-213ENST00000529637 TEX13BQ9BXU2 312 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 ACAD9Q9H845 621 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 AS3MTQ9HBK9 375 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 NUB1Q9Y5A7 615 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
USP48-213ENST00000529637 ALOX15BO15296 676 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms