RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 RPF1Q9H9Y2 349 aaKnown RBP9.19□□□□□ -0.94
TGFBR3-208ENST00000529608 CBX8Q9HC52 389 aa9.19□□□□□ -0.94
TGFBR3-208ENST00000529608 BLOC1S4Q9NUP1 217 aa9.19□□□□□ -0.94
TGFBR3-208ENST00000529608 ABI2Q9NYB9 513 aaPredicted RBP9.19□□□□□ -0.94
TGFBR3-208ENST00000529608 SLC8A2Q9UPR5 921 aa9.19□□□□□ -0.94
TGFBR3-208ENST00000529608 AKAP13Q12802 2813 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 LNP1A1A4G5 178 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 CNOT1A5YKK6 2376 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 C4orf47A7E2U8 309 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 LAD1O00515 517 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 CYB561D2O14569 222 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 HNRNPDLO14979 420 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 AKAP3O75969 853 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ZNF202O95125 648 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 FGF19O95750 216 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 PROS1P07225 676 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 BCKDHBP21953 392 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 CDC25CP30307 473 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 TUFMP49411 452 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ZNF165P49910 485 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 NDUFA8P51970 172 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 GRIN1Q05586 938 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 GRSF1Q12849 480 aaKnown RBP eCLIP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 DHX8Q14562 1220 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 TMEM132DQ14C87 1099 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ZC2HC1CQ53FD0 456 aaPredicted RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 RNF43Q68DV7 783 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ABCA7Q8IZY2 2146 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 PYM1Q9BRP8 204 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 PI4K2AQ9BTU6 479 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 MSTO1Q9BUK6 570 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 EDEM2Q9BV94 578 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 TPSD1Q9BZJ3 242 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 VPS45Q9NRW7 570 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 THG1LQ9NWX6 298 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ADAMTS9Q9P2N4 1935 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ZKSCAN5Q9Y2L8 839 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 PCDHGA5Q9Y5G8 931 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 WNT6Q9Y6F9 365 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 ZZEF1O43149 2961 aa9.18□□□□□ -0.94
TGFBR3-208ENST00000529608 BCLAF3A2AJT9 711 aaKnown RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 GOLGA6L19H0YKK7 550 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 K7ENM7 598 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 CDX4O14627 284 aaPredicted RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 XPOTO43592 962 aaKnown RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ZNF500O60304 480 aaPredicted RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 HNRNPLP14866 589 aaKnown RBP eCLIP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ACAT1P24752 427 aaKnown RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 AVPR1AP37288 418 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 SYKP43405 635 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 NOVA1P51513 510 aaKnown RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ZNF131P52739 623 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ZXDBP98169 803 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 GTF2BQ00403 316 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 CREB5Q02930 508 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 MESP2Q0VG99 397 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 FOXC1Q12948 553 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 DMC1Q14565 340 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 VEPH1Q14D04 833 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ZNF77Q15935 545 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 DDR2Q16832 855 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 GAB4Q2WGN9 574 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 UNQ6494/PRO21346Q6UXR6 183 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 SYT13Q7L8C5 426 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 MON1AQ86VX9 555 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 OSTM1Q86WC4 334 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 GPBP1Q86WP2 473 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 SFTPA1Q8IWL2 248 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 CEP57L1Q8IYX8 460 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 FRMD1Q8N878 549 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 SPPL2BQ8TCT7 592 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 PKMYT1Q99640 499 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 P2RY13Q9BPV8 354 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 BPIFA3Q9BQP9 254 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 CCSER1Q9C0I3 900 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 LINC00597Q9H2U6 94 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ECT2Q9H8V3 914 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 PRDM9Q9NQV7 894 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 DPP3Q9NY33 737 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 FAM13BQ9NYF5 915 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 LARSQ9P2J5 1176 aaKnown RBP9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 ODF2LQ9ULJ1 636 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 HPSEQ9Y251 543 aa9.17□□□□□ -0.94
TGFBR3-208ENST00000529608 CEP192Q8TEP8 1941 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 C2orf78A6NCI8 922 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 KPNA7A9QM74 516 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 ATG13O75143 517 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 PFKFB1P16118 471 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 DRD1P21728 446 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 CYP2F1P24903 491 aa9.16□□□□□ -0.94
TGFBR3-208ENST00000529608 ADSSP30520 456 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms