RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 SLC41A1Q8IVJ1 513 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 DEFB119Q8N690 84 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 TTC16Q8NEE8 873 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 CEP295NLQ96MC4 621 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 ACBD6Q9BR61 282 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 PYM1Q9BRP8 204 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 ASB7Q9H672 318 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 TMLHEQ9NVH6 421 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 CITO14578 2027 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 C2orf78A6NCI8 922 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 SFI1A8K8P3 1242 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 CYP17A1P05093 508 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 GPR15P49685 360 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 CDR1P51861 262 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 POU5F1Q01860 360 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 WDR45BQ5MNZ6 344 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 KCTD17Q8N5Z5 321 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 PRORYQ9H606 182 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 ARHGEF4Q9NR80 690 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 CPSF3Q9UKF6 684 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 C2CD2Q9Y426 696 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 PCDHGB2Q9Y5G2 931 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 PI4KAP42356 2102 aa12.5□□□□□ -0.41
AMBRA1-207ENST00000529553 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 PLXNB3Q9ULL4 1909 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 A0A0B4J269 797 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 E9PMD0 336 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 LEFTY2O00292 366 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 CAPN9O14815 690 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 ADH1CP00326 375 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 PIGRP01833 764 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 GABRG2P18507 467 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 CYP2F1P24903 491 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 PPP3CCP48454 512 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 SLC7A9P82251 487 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 ZXDBP98169 803 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 RESTQ13127 1097 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 TMEM132DQ14C87 1099 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 ZNF174Q15697 407 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 CFAP221Q4G0U5 840 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 SDHAF4Q5VUM1 108 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 RHBDF2Q6PJF5 856 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 IL27RAQ6UWB1 636 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 IGSF22Q8N9C0 903 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 BAHD1Q8TBE0 780 aaPredicted RBP12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 SETD7Q8WTS6 366 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 BICD1Q96G01 975 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 FUBP3Q96I24 572 aaKnown RBP eCLIP12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 HSPA12BQ96MM6 686 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 TOR4AQ9NXH8 423 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 NAV2Q8IVL1 2488 aa12.49□□□□□ -0.41
AMBRA1-207ENST00000529553 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 A0A1B0GTW7 788 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 TBC1D3BA6NDS4 549 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 J3QKU1 62 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 NDUFS2O75306 463 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 PNPLA4P41247 253 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 MAGEA11P43364 429 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 LIG4P49917 911 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 ATP2C1P98194 919 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 MESP2Q0VG99 397 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 GRIK2Q13002 908 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 SMAD1Q15797 465 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 SV2CQ496J9 727 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 KRT79Q5XKE5 535 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 LARP1BQ659C4 914 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 SFTPA1Q8IWL2 248 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 PHTF2Q8N3S3 785 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 C4orf32Q8N8J7 132 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 DNASE2BQ8WZ79 361 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 CRELD1Q96HD1 420 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 TRPM5Q9NZQ8 1165 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 KCND2Q9NZV8 630 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 TBC1D14Q9P2M4 693 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 PTPRDP23468 1912 aa12.48□□□□□ -0.41
AMBRA1-207ENST00000529553 PLXND1Q9Y4D7 1925 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms