RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ENOX2Q16206 610 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 KYAT1Q16773 422 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 L1TD1Q5T7N2 865 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 CNNM4Q6P4Q7 775 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 LILRA6Q6PI73 481 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 PRSS55Q6UWB4 352 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 GRASPQ7Z6J2 395 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ITFG1Q8TB96 612 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 LEO1Q8WVC0 666 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 DHX58Q96C10 678 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 HVCN1Q96D96 273 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 C7orf25Q9BPX7 421 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 CLSTN3Q9BQT9 956 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 TTPALQ9BTX7 342 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 TRIM9Q9C026 710 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 MRPL44Q9H9J2 332 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 PLEKHA5Q9HAU0 1116 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 RBM12Q9NTZ6 932 aaKnown RBP9.16□□□□□ -0.94
SSBP3-212ENST00000528930 PANK4Q9NVE7 773 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 TBC1D7Q9P0N9 293 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 ANKMY1Q9P2S6 941 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 PIAS3Q9Y6X2 628 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 MGAQ8IWI9 3026 aa9.16□□□□□ -0.94
SSBP3-212ENST00000528930 TCHHQ07283 1943 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 ANK1P16157 1881 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 I3L4J1 428 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 ADAM12O43184 909 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 TGM5O43548 720 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 GCNT3O95395 438 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 SPATA31D3P0C874 917 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 CYP3A5P20815 502 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 CASP1P29466 404 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 LRPAP1P30533 357 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 RPL9P32969 192 aaKnown RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 ACOT2P49753 483 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 MLLT6P55198 1093 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 IRX4P78413 519 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 PTSQ03393 145 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 EHHADHQ08426 723 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 ADALQ6DHV7 355 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 SLFN12LQ6IEE8 588 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 CRELD2Q6UXH1 353 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 SPATA31D4Q6ZUB0 917 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 CEP57Q86XR8 500 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 HPS3Q969F9 1004 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 ELSPBP1Q96BH3 223 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 FCRL3Q96P31 734 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 MSTO1Q9BUK6 570 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 LRRC27Q9C0I9 530 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 RPF1Q9H9Y2 349 aaKnown RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 FAM13BQ9NYF5 915 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 TUBGCP4Q9UGJ1 667 aa9.15□□□□□ -0.94
SSBP3-212ENST00000528930 EVLQ9UI08 416 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 AGO2Q9UKV8 859 aaKnown RBP9.15□□□□□ -0.94
SSBP3-212ENST00000528930 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 HELZP42694 1942 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 TTLL8A6PVC2 850 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 RHOBTB1O94844 696 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 PRPF6O94906 941 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 CMA1P23946 247 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 FCARP24071 287 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 ITPKBP27987 946 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 TKTP29401 623 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 HOXD13P35453 343 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 PXNP49023 591 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 KRT85P78386 507 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 AMPD3Q01432 767 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 POU5F1Q01860 360 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 CREMQ03060 361 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 HNRNPDQ14103 355 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 MRPL58Q14197 206 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 BECN1Q14457 450 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 PSMD5Q16401 504 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 DGKKQ5KSL6 1271 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 VASH1Q7L8A9 365 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 GLYCTKQ8IVS8 523 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 CD302Q8IX05 232 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 WHAMMQ8TF30 809 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 WBP1Q96G27 269 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 MSANTD3Q96H12 275 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 SPATA32Q96LK8 384 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 ACCSQ96QU6 501 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 TSPAN18Q96SJ8 248 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 BRD9Q9H8M2 597 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 MAGEF1Q9HAY2 307 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 ZNF334Q9HCZ1 680 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 MTRRQ9UBK8 725 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 KCNH3Q9ULD8 1083 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 UBQLN1Q9UMX0 589 aaKnown RBP9.14□□□□□ -0.95
SSBP3-212ENST00000528930 HPSEQ9Y251 543 aa9.14□□□□□ -0.95
SSBP3-212ENST00000528930 FAM237AA0A1B0GTK4 181 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms