RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PSMG2Q969U7 264 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 FAM84AQ96KN4 292 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 B3GALT6Q96L58 329 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 PKMYT1Q99640 499 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 BAG1Q99933 345 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 RTP3Q9BQQ7 232 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 B3GNT5Q9BYG0 378 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 TTYH1Q9H313 450 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 HAUS4Q9H6D7 363 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 ASAH2Q9NR71 780 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 TLR8Q9NR97 1041 aaKnown RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 OLA1Q9NTK5 396 aaKnown RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 FAM49BQ9NUQ9 324 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 RRN3Q9NYV6 651 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 INTUQ9ULD6 942 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 HCFC2Q9Y5Z7 792 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 PATJQ8NI35 1801 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 ARHGAP6O43182 974 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 RTN2O75298 545 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 PAPLNO95428 1278 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 RALAP11233 206 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 RPL17P18621 184 aaKnown RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 BRD2P25440 801 aaKnown RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 YWHAQP27348 245 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 TUBP50607 506 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 FXR1P51114 621 aaKnown RBP eCLIP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 KPNA1P52294 538 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 CENPCQ03188 943 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 C1QBPQ07021 282 aaKnown RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 ADAM15Q13444 863 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 CAMK1Q14012 370 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 SLC18A3Q16572 532 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 IFI16Q16666 785 aaKnown RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 TCEAL5Q5H9L2 206 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 CLEC20AQ6ZU45 233 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 PDZD4Q76G19 769 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 BEND5Q7L4P6 421 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 IRF2BP2Q7Z5L9 587 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 RBM23Q86U06 439 aaKnown RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 LRRTM3Q86VH5 581 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 MICALL1Q8N3F8 863 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 VN1R2Q8NFZ6 395 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 AUTS2Q8WXX7 1259 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 KAT5Q92993 513 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 E2F7Q96AV8 911 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 C18orf8Q96DM3 657 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 MYRFLQ96LU7 910 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 PGLYRP2Q96PD5 576 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 DPEP3Q9H4B8 488 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 ASNSD1Q9NWL6 643 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 TRPM5Q9NZQ8 1165 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 NOCTQ9UK39 431 aaKnown RBP8.36□□□□□ -1.07
SSBP3-211ENST00000528787 YIPF1Q9Y548 306 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 SCINQ9Y6U3 715 aa8.36□□□□□ -1.07
SSBP3-211ENST00000528787 PLXNA3P51805 1871 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CCDC195A0A1B0GUA6 201 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 F8VP50 259 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 EPHB6O15197 1021 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ATP2C2O75185 946 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ZBED1O96006 694 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CYP1A1P04798 512 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 OR4Q2P0C623 313 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CCDC130P13994 396 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CYP2F1P24903 491 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 MSNP26038 577 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 IRS1P35568 1242 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 GPD2P43304 727 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ADKP55263 362 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 MAP3K7CLP57077 242 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 PDE4CQ08493 712 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TWF1Q12792 350 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 PDCLQ13371 301 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ZNF268Q14587 947 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 COL19A1Q14993 1142 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CLEC16AQ2KHT3 1053 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ACAD10Q6JQN1 1059 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ANKRD54Q6NXT1 300 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ARCQ7LC44 396 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CCDC186Q7Z3E2 898 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TMEM110Q86TL2 294 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 NOP9Q86U38 636 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 PHF13Q86YI8 300 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ZNF276Q8N554 614 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 KIAA1958Q8N8K9 716 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 C12orf29Q8N999 325 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TC2NQ8N9U0 490 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 SPC24Q8NBT2 197 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ATAD1Q8NBU5 361 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 SLC35F5Q8WV83 523 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CTNNBL1Q8WYA6 563 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms