RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 UNGP13051 313 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NPR3P17342 541 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MAGEA11P43364 429 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GPR15P49685 360 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CLCN4P51793 760 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KIF11P52732 1056 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MAP3K7CLP57077 242 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GFPT1Q06210 699 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 BST2Q10589 180 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NAA35Q5VZE5 725 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DNAAF5Q86Y56 855 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TMEM35BQ8NCS4 154 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KIAA1524Q8TCG1 905 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SLC22A17Q8WUG5 538 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CPA5Q8WXQ8 436 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PPM1EQ8WY54 764 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TLE6Q9H808 572 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 F8VP50 259 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ZNF263O14978 683 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GABBR2O75899 941 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GLUD1P00367 558 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SETSIPP0DME0 302 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 EPCAMP16422 314 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ANXA13P27216 316 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GRIK1P39086 918 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NRIP1P48552 1158 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SLC18A3Q16572 532 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DDR2Q16832 855 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MGAT5BQ3V5L5 792 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SDHAF4Q5VUM1 108 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PMF1Q6P1K2 205 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PIGZQ86VD9 579 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 VPS36Q86VN1 386 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SCN4BQ8IWT1 228 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TCEAL8Q8IYN2 117 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CCDC170Q8IYT3 715 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 KREMEN2Q8NCW0 462 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CCDC112Q8NEF3 446 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 SEPT5Q99719 369 aaPredicted RBP12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 HSFX1Q9UBD0 423 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 FBXW11Q9UKB1 542 aa12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 EPN1Q9Y6I3 576 aaPredicted RBP12.84□□□□□ -0.35
TRAF3IP2-211ENST00000528599 XPO1O14980 1071 aaKnown RBP12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ELF1P32519 619 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PLA2G4AP47712 749 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 RGS7P49802 495 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CENPCQ03188 943 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PDCLQ13371 301 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 DUSP6Q16828 381 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 STKLD1Q8NE28 680 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 C8orf48Q96LL4 319 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CPXM1Q96SM3 734 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 LMCD1Q9NZU5 365 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 TJP2Q9UDY2 1190 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 MAFFQ9ULX9 164 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 CEP83Q9Y592 693 aa12.83□□□□□ -0.35
TRAF3IP2-211ENST00000528599 PRRG1O14668 218 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NDUFA10O95299 355 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LCA5LO95447 670 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C1RP00736 705 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GZMAP12544 262 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ATF6P18850 670 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RPL34P49207 117 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TERF1P54274 439 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SLC8A3P57103 927 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PTPN20Q4JDL3 420 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CCDC122Q5T0U0 273 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GPRIN1Q7Z2K8 1008 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GPR152Q8TDT2 470 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 STK32AQ8WU08 396 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 UBXN6Q9BZV1 441 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ISCUQ9H1K1 167 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NSUN3Q9H649 340 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 YIPF1Q9Y548 306 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 INSL5Q9Y5Q6 135 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 HCFC2Q9Y5Z7 792 aa12.83□□□□□ -0.36
TRAF3IP2-211ENST00000528599 EIF3CLB5ME19 914 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PIK3R2O00459 728 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms