RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ZNF189O75820 626 aaPredicted RBP18.66■□□□□ 0.58
LTBP3-210ENST00000528516 ALCAMQ13740 583 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 ANGEL2Q5VTE6 544 aaKnown RBP18.66■□□□□ 0.58
LTBP3-210ENST00000528516 FAM151AQ8WW52 585 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 POLR3CQ9BUI4 534 aaPredicted RBP18.66■□□□□ 0.58
LTBP3-210ENST00000528516 MANSC1Q9H8J5 431 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 TAS2R1Q9NYW7 299 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 MAGEA8P43361 318 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 RARRES1P49788 294 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 BCAR1P56945 870 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 CATSPER4Q7RTX7 472 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 SATL1Q86VE3 508 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 FAM71DQ8N9W8 422 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 UMODL1Q5DID0 1318 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 SPECC1L-ADORA2AF8WAN1 911 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 EIF3EP60228 445 aaKnown RBP18.65■□□□□ 0.58
LTBP3-210ENST00000528516 ASPHQ12797 758 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 DUOXA2Q1HG44 320 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 SLFN12LQ6IEE8 588 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 FOXR2Q6PJQ5 311 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 TTC7BQ86TV6 843 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 SCUBE1Q8IWY4 988 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 KRT82Q9NSB4 513 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 PAIP2BQ9ULR5 123 aaKnown RBP18.65■□□□□ 0.58
LTBP3-210ENST00000528516 MYL2P10916 166 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 NOP9Q86U38 636 aaKnown RBP18.65■□□□□ 0.58
LTBP3-210ENST00000528516 RYBPQ8N488 228 aaPredicted RBP18.65■□□□□ 0.58
LTBP3-210ENST00000528516 WDR18Q9BV38 432 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 PHACTR1Q9C0D0 580 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 MTMR12Q9C0I1 747 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 PCDHB2Q9Y5E7 798 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.65■□□□□ 0.58
LTBP3-210ENST00000528516 TRPA1O75762 1119 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 NME3Q13232 169 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 RSBN1LQ6PCB5 846 aaPredicted RBP18.65■□□□□ 0.58
LTBP3-210ENST00000528516 EXT2Q93063 718 aa18.65■□□□□ 0.58
LTBP3-210ENST00000528516 NRAPQ86VF7 1730 aa18.64■□□□□ 0.58
LTBP3-210ENST00000528516 DDX60Q8IY21 1712 aaKnown RBP18.64■□□□□ 0.58
LTBP3-210ENST00000528516 FCHO1O14526 889 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 OR6B1O95007 311 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 ITGA2BP08514 1039 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 RBP3P10745 1247 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 NT5C2P49902 561 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 GLRA4Q5JXX5 417 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 RIPOR1Q6ZS17 1223 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 DEPDC1BQ8WUY9 529 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SPATA33Q96N06 139 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 EBF3Q9H4W6 596 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 GPATCH2LQ9NWQ4 482 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 DUOX1Q9NRD9 1551 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SPATA31D3P0C874 917 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SPATA31C1P0DKV0 1188 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 GALK1P51570 392 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 RASA2Q15283 850 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 TRIP10Q15642 601 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 NBPF12Q5TAG4 269 aaPredicted RBP18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SPATA31D4Q6ZUB0 917 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 IL1RAPL1Q9NZN1 696 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SENP1Q9P0U3 644 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SNX9Q9Y5X1 595 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 ACTL7BQ9Y614 415 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 LPXNO60711 386 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 DGAT1O75907 488 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 PGK2P07205 417 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 PDGFRAP16234 1089 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 SOX11P35716 441 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 GPC3P51654 580 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 ADARP55265 1226 aaKnown RBP18.64■□□□□ 0.57
LTBP3-210ENST00000528516 FOXD4Q12950 439 aaPredicted RBP18.64■□□□□ 0.57
LTBP3-210ENST00000528516 EMC2Q15006 297 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 PYDC1Q8WXC3 89 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 NACA2Q9H009 215 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 RANBP17Q9H2T7 1088 aaKnown RBP18.64■□□□□ 0.57
LTBP3-210ENST00000528516 ACAD9Q9H845 621 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 LRRC4Q9HBW1 653 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 PCDHA2Q9Y5H9 948 aa18.64■□□□□ 0.57
LTBP3-210ENST00000528516 DPEP1P16444 411 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 SFNP31947 248 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 TFDP1Q14186 410 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 PRR11Q96HE9 360 aaPredicted RBP18.63■□□□□ 0.57
LTBP3-210ENST00000528516 TTC25Q96NG3 672 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 LRRC19Q9H756 370 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 LGALS13Q9UHV8 139 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ZMYM2Q9UBW7 1377 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 KCNN4O15554 427 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ENTPD3O75355 529 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 CRCPO75575 148 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 CYP1A1P04798 512 aaPredicted RBP18.63■□□□□ 0.57
LTBP3-210ENST00000528516 LCP1P13796 627 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ALDH18A1P54886 795 aaKnown RBP18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ARPP19P56211 112 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 C7orf43Q8WVR3 580 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 PCDHA3Q9Y5H8 950 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ASTN1O14525 1302 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 MROH7Q68CQ1 1323 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 LOC100653049A0A140TA62 436 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 KRT34O76011 436 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms