RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 COMMD8Q9NX08 183 aa12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 RAB20Q9NX57 234 aa12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 DLGAP2Q9P1A6 1054 aa12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 KIF26AQ9ULI4 1882 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 MUC6Q6W4X9 2439 aa12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 NCANO14594 1321 aa12.88□□□□□ -0.35
TRAPPC4-209ENST00000528230 NCAM2O15394 837 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 TADA3O75528 432 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 MAGEA9P43362 315 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 PDE6CP51160 858 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 TPRG1Q6ZUI0 275 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 FUKQ8N0W3 1084 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 STKLD1Q8NE28 680 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 SMARCD1Q96GM5 515 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 C8orf33Q9H7E9 229 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 TRPM5Q9NZQ8 1165 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
TRAPPC4-209ENST00000528230 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 TRAV19A0A0A6YYK7 116 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 SHISA7A6NL88 538 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 FAM170BA6NMN3 283 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 CLDN5O00501 218 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 PMM2O15305 246 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 CILPO75339 1184 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 RTN3O95197 1032 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 USP17L7P0C7H9 530 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 TCF3P15923 654 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 WDR44Q5JSH3 913 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 TCERG1LQ5VWI1 586 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 FAM35AQ86V20 835 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 NELFBQ8WX92 580 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 OVCA2Q8WZ82 227 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 SLC35C1Q96A29 364 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 CLDN23Q96B33 292 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 SLITRK1Q96PX8 696 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 HNRNPABQ99729 332 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 MED10Q9BTT4 135 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 CSNK1G1Q9HCP0 422 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 TMEM30AQ9NV96 361 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 IL37Q9NZH6 218 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 GCNT4Q9P109 453 aa12.86□□□□□ -0.35
TRAPPC4-209ENST00000528230 ZNF840PA6NDX5 716 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 H0Y858 1186 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 BIN1O00499 593 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 LRRN2O75325 713 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 GNA14O95837 355 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 DCNP07585 359 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 HDCP19113 662 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 YWHAQP27348 245 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 RPS9P46781 194 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 USP46P62068 366 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 UBXN2BQ14CS0 331 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 CBWD6Q4V339 395 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 CBWD3Q5JTY5 395 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 CBWD5Q5RIA9 395 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 KLHL10Q6JEL2 608 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 PDZD8Q8NEN9 1154 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 FAM3CQ92520 227 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 KCNK16Q96T55 309 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 FAM83CQ9BQN1 747 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 MTF2Q9Y483 593 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 F5P12259 2224 aa12.85□□□□□ -0.35
TRAPPC4-209ENST00000528230 COL4A3Q01955 1670 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 PATJQ8NI35 1801 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 FAM92AA1XBS5 289 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 TNFRSF10BO14763 440 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 P4HA2O15460 535 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 AP1G2O75843 785 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 FGFR1OPO95684 399 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CKMP06732 381 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 CD72P21854 359 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 TARSP26639 723 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 FMO5P49326 533 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 TAF10Q12962 218 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 PAK1Q13153 545 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 FZD5Q13467 585 aa12.84□□□□□ -0.35
TRAPPC4-209ENST00000528230 ANGPT1Q15389 498 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms