RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 RTP3Q9BQQ7 232 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 SDCBP2Q9H190 292 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 CYP3A43Q9HB55 503 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
CCDC84-205ENST00000528088 GTF3C4Q9UKN8 822 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 CDH9Q9ULB4 789 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
CCDC84-205ENST00000528088 C2orf16Q68DN1 1984 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 TRIOO75962 3097 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 MTMR11A4FU01 709 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ERVH48-1M5A8F1 160 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 CCL16O15467 120 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ATP2C2O75185 946 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ABL1P00519 1130 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ATF2P15336 505 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ALDH1A3P47895 512 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 NDST1P52848 882 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ZXDAP98168 799 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 DUSP4Q13115 394 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 GPR17Q13304 367 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ZNF211Q13398 564 aaPredicted RBP11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ORC1Q13415 861 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 CUL2Q13617 745 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 NCAPHQ15003 741 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 LRSAM1Q6UWE0 723 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 C4orf50Q6ZRC1 276 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 LUZP1Q86V48 1076 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 ELMOD1Q8N336 334 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC84-205ENST00000528088 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 MED10Q9BTT4 135 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 SMOC2Q9H3U7 446 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.53
CCDC84-205ENST00000528088 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 GABRDO14764 452 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 PMM2O15305 246 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 XYLBO75191 536 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SERPINC1P01008 464 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 MTHFRP42898 656 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 COPB1P53618 953 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SMARCB1Q12824 385 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TAF12Q16514 161 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 LILRA6Q6PI73 481 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 CAPN12Q6ZSI9 719 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 RRAGAQ7L523 313 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 GPR149Q86SP6 731 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ACOT1Q86TX2 421 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SCN4BQ8IWT1 228 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TTC39CQ8N584 583 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ATAD1Q8NBU5 361 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 B3GALNT2Q8NCR0 500 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SPPL2BQ8TCT7 592 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SMG7Q92540 1137 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 MYLPFQ96A32 169 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 RIPOR3Q96MK2 946 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 BCO2Q9BYV7 579 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 DPEP3Q9H4B8 488 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ZDHHC7Q9NXF8 308 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 EGFL7Q9UHF1 273 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 MAP4K5Q9Y4K4 846 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 INSL5Q9Y5Q6 135 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 MYBPHLA2RUH7 354 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ZBTB24O43167 697 aaPredicted RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ABLIM3O94929 683 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SEC24AO95486 1093 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 C1RP00736 705 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ASGR2P07307 311 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 KRT5P13647 590 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 PTPN1P18031 435 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 SLC9A1P19634 815 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 VARSP26640 1264 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 UBXN1Q04323 297 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TWF1Q12792 350 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 PLD1Q13393 1074 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 VEPH1Q14D04 833 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 MIIPQ5JXC2 388 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TRIM67Q6ZTA4 783 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms