RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 KAT2BQ92831 832 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 KIF12Q96FN5 646 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 MAGEB18Q96M61 343 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 ELAC2Q9BQ52 826 aaKnown RBP16.08■□□□□ 0.17
USH1C-207ENST00000527720 TSPAN16Q9UKR8 245 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 RRN3P2A6NIE6 340 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 MCF2LO15068 1137 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 SNX3O60493 162 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 OAS1P00973 400 aaKnown RBP16.08■□□□□ 0.16
USH1C-207ENST00000527720 MMP3P08254 477 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 GCAP28676 217 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 PDIA2Q13087 525 aaKnown RBP16.08■□□□□ 0.16
USH1C-207ENST00000527720 LRRC14Q15048 493 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 PCBP1Q15365 356 aaKnown RBP eCLIP16.08■□□□□ 0.16
USH1C-207ENST00000527720 DGKDQ16760 1214 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 FAM47CQ5HY64 1035 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 NAT8LQ8N9F0 302 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 UBA3Q8TBC4 463 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 MGARPQ8TDB4 240 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 NCAPGQ9BPX3 1015 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
USH1C-207ENST00000527720 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.08■□□□□ 0.16
USH1C-207ENST00000527720 E7ESA3 106 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 GSTA1P08263 222 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 CD48P09326 243 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 TSHRP16473 764 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 STIP1P31948 543 aaKnown RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 STX2P32856 288 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 PHBP35232 272 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 SNX16P57768 344 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 TFDP2Q14188 446 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 TMED2Q15363 201 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 ANKRD23Q86SG2 305 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 VSIG1Q86XK7 387 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 TMEM130Q8N3G9 435 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 ANKRD42Q8N9B4 389 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 CPT1BQ92523 772 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 USP6NLQ92738 828 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 PLCD4Q9BRC7 762 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 FAM47DPA6NHR8 397 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 TCP11X1B4DZS4 312 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 BTBD19C9JJ37 291 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 DPYSL4O14531 572 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 PRPF4O43172 522 aaKnown RBP eCLIP16.07■□□□□ 0.16
USH1C-207ENST00000527720 CYP3A5P20815 502 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 RPL22P35268 128 aaKnown RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 GDF10P55107 478 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 EIF3EP60228 445 aaKnown RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 MPP2Q14168 576 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 GRB14Q14449 540 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 FASTKD3Q14CZ7 662 aaKnown RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 IQSEC1Q6DN90 963 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 OR6B2Q6IFH4 312 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 DPP9Q86TI2 863 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 RXFP2Q8WXD0 754 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 HSPH1Q92598 858 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 MAK16Q9BXY0 300 aaKnown RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 VPS37BQ9H9H4 285 aa16.07■□□□□ 0.16
USH1C-207ENST00000527720 SAE1Q9UBE0 346 aaPredicted RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
USH1C-207ENST00000527720 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.06■□□□□ 0.16
USH1C-207ENST00000527720 E5RJQ4 531 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 DNM1LO00429 736 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 PFKMP08237 780 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 PDGFRAP16234 1089 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 YBX3P16989 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
USH1C-207ENST00000527720 SMPD1P17405 629 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 DESP17661 470 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 SCTRP47872 440 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 PDK2Q15119 407 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 PKDCCQ504Y2 493 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 SLC27A1Q6PCB7 646 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 FAM183BPQ6ZVS7 135 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 MAP7D3Q8IWC1 876 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 LRRC52Q8N7C0 313 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 ATP11CQ8NB49 1132 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 MAML3Q96JK9 1138 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 CALN1Q9BXU9 219 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
USH1C-207ENST00000527720 SMG5Q9UPR3 1016 aaKnown RBP16.06■□□□□ 0.16
USH1C-207ENST00000527720 PRPSAP2O60256 369 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 RBP3P10745 1247 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 IL9RQ01113 521 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 NOMO1Q15155 1222 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 BOLA3Q53S33 107 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 EFHC2Q5JST6 749 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 NUGGCQ68CJ6 796 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 CYP4V2Q6ZWL3 525 aaPredicted RBP16.06■□□□□ 0.16
USH1C-207ENST00000527720 GPR142Q7Z601 462 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 ZDHHC17Q8IUH5 632 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 SNX27Q96L92 541 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms