RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 CPNE7Q9UBL6 633 aa9.04□□□□□ -0.96
CTNND1-217ENST00000527599 TBC1D4O60343 1298 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 TJP3O95049 919 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 CDK4P11802 303 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 MICU3Q86XE3 530 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 TMEM171Q8WVE6 324 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 OSCP1Q8WVF1 389 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 LENG8Q96PV6 779 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-217ENST00000527599 THAP7Q9BT49 309 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-217ENST00000527599 C1orf112Q9NSG2 853 aa9.03□□□□□ -0.96
CTNND1-217ENST00000527599 FAM227AF5H4B4 570 aa9.02□□□□□ -0.97
CTNND1-217ENST00000527599 SMIM22K7EJ46 135 aa9.02□□□□□ -0.97
CTNND1-217ENST00000527599 CYP1B1Q16678 543 aa9.02□□□□□ -0.97
CTNND1-217ENST00000527599 IZUMO1Q8IYV9 350 aa9.02□□□□□ -0.97
CTNND1-217ENST00000527599 PPP2R3CQ969Q6 453 aa9.02□□□□□ -0.97
CTNND1-217ENST00000527599 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
CTNND1-217ENST00000527599 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-217ENST00000527599 PDE8BO95263 885 aa9.01□□□□□ -0.97
CTNND1-217ENST00000527599 U2AF1L5P0DN76 240 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-217ENST00000527599 SUMO3P55854 103 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-217ENST00000527599 U2AF1Q01081 240 aaKnown RBP eCLIP9.01□□□□□ -0.97
CTNND1-217ENST00000527599 SLC10A2Q12908 348 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-217ENST00000527599 MLC1Q15049 377 aa9.01□□□□□ -0.97
CTNND1-217ENST00000527599 SLC9A4Q6AI14 798 aa9.01□□□□□ -0.97
CTNND1-217ENST00000527599 DPY19L3Q6ZPD9 716 aa9.01□□□□□ -0.97
CTNND1-217ENST00000527599 ZNF804AQ7Z570 1209 aa9.01□□□□□ -0.97
CTNND1-217ENST00000527599 CAND1Q86VP6 1230 aaKnown RBP9.01□□□□□ -0.97
CTNND1-217ENST00000527599 ZNF518BQ9C0D4 1074 aa9.01□□□□□ -0.97
CTNND1-217ENST00000527599 CFAP69A5D8W1 941 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 SATB1Q01826 763 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 GRM1Q13255 1194 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 RAB32Q13637 225 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 ARHGAP29Q52LW3 1261 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 PRAMEF17Q5VTA0 474 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 VGLL2Q8N8G2 317 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 CYP2W1Q8TAV3 490 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
CTNND1-217ENST00000527599 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
CTNND1-217ENST00000527599 WDR91A4D1P6 747 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 TRIM43BA6NCK2 446 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 TSPAN6O43657 245 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 NPSP0C0P6 89 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 PRKAG1P54619 331 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 TPTEP56180 551 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 TRIM43Q96BQ3 446 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-217ENST00000527599 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 XPNPEP3Q9NQH7 507 aa8.99□□□□□ -0.97
CTNND1-217ENST00000527599 SSBP2P81877 361 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-217ENST00000527599 HOXA4Q00056 320 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-217ENST00000527599 LRCH2Q5VUJ6 765 aa8.98□□□□□ -0.97
CTNND1-217ENST00000527599 C1QL2Q7Z5L3 287 aa8.98□□□□□ -0.97
CTNND1-217ENST00000527599 KCTD20Q7Z5Y7 419 aa8.98□□□□□ -0.97
CTNND1-217ENST00000527599 CHSY1Q86X52 802 aa8.98□□□□□ -0.97
CTNND1-217ENST00000527599 A1CFQ9NQ94 594 aaKnown RBP8.98□□□□□ -0.97
CTNND1-217ENST00000527599 RNF7Q9UBF6 113 aa8.98□□□□□ -0.97
CTNND1-217ENST00000527599 CCNL1Q9UK58 526 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-217ENST00000527599 PRRT4C9JH25 899 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 FRS3O43559 492 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 FPR3P25089 353 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 TUBA4AP68366 448 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 E2F1Q01094 437 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 SLC44A4Q53GD3 710 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 C3orf38Q5JPI3 329 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 ABHD11Q8NFV4 315 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 SUCLG2Q96I99 432 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 PRR25Q96S07 402 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 SH2D3AQ9BRG2 576 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 BHMT2Q9H2M3 363 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 SACM1LQ9NTJ5 587 aa8.97□□□□□ -0.97
CTNND1-217ENST00000527599 TRMT13Q9NUP7 481 aaKnown RBP8.97□□□□□ -0.97
CTNND1-217ENST00000527599 DNMT3BQ9UBC3 853 aaKnown RBP8.97□□□□□ -0.97
CTNND1-217ENST00000527599 MPGP29372 298 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 GRM3Q14832 879 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 L1TD1Q5T7N2 865 aaKnown RBP8.96□□□□□ -0.98
CTNND1-217ENST00000527599 KIAA1614Q5VZ46 1190 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 PAPD7Q5XG87 772 aaKnown RBP8.96□□□□□ -0.98
CTNND1-217ENST00000527599 FCRL6Q6DN72 434 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 KIRREL2Q6UWL6 708 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 TRIM72Q6ZMU5 477 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 FAM156AQ8NDB6 213 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 DNAJB14Q8TBM8 379 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 TSR2Q969E8 191 aaKnown RBP8.96□□□□□ -0.98
CTNND1-217ENST00000527599 C1QTNF7Q9BXJ2 289 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 TPCN1Q9ULQ1 816 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 CDY1Q9Y6F8 540 aa8.96□□□□□ -0.98
CTNND1-217ENST00000527599 ISM1B1AKI9 464 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 PYCARD-AS1I3L0S3 204 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 AP4M1O00189 453 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 ADAMTS3O15072 1205 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 PRR35P0CG20 571 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 BRAFP15056 766 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 FMO1Q01740 532 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 GALEQ14376 348 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 CNGA2Q16280 664 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 SRSF7Q16629 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTNND1-217ENST00000527599 TBC1D25Q3MII6 688 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 RNASE12Q5GAN4 147 aaKnown RBP8.95□□□□□ -0.98
CTNND1-217ENST00000527599 CEP78Q5JTW2 689 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 SPSB4Q96A44 273 aa8.95□□□□□ -0.98
CTNND1-217ENST00000527599 NMD3Q96D46 503 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms