RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 LIMK1P53667 647 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 SF3A2Q15428 464 aaKnown RBP16.07■□□□□ 0.16
LTBP3-206ENST00000526825 PLA2G2CQ5R387 149 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 ATL3Q6DD88 541 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 CNNM4Q6P4Q7 775 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 C4orf50Q6ZRC1 276 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
LTBP3-206ENST00000526825 SYT13Q7L8C5 426 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 SH3RF2Q8TEC5 729 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 CD101Q93033 1021 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 CEP295NLQ96MC4 621 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 RXFP3Q9NSD7 469 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 ARHGAP26Q9UNA1 814 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 NME7Q9Y5B8 376 aa16.07■□□□□ 0.16
LTBP3-206ENST00000526825 GREB1Q4ZG55 1949 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 TGFB1I1O43294 461 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 KLRC4O43908 158 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 TNNC2P02585 160 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 CKMP06732 381 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 FAM163BP0C2L3 166 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
LTBP3-206ENST00000526825 BDNFP23560 247 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 IFNAR2P48551 515 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 USP46P62068 366 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 PSMC1P62191 440 aaKnown RBP16.06■□□□□ 0.16
LTBP3-206ENST00000526825 MAPRE1Q15691 268 aaKnown RBP16.06■□□□□ 0.16
LTBP3-206ENST00000526825 CCDC6Q16204 474 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 PLK5Q496M5 336 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 UNC13DQ70J99 1090 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 WDR49Q8IV35 697 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 RPLP0P6Q8NHW5 317 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 SCFD1Q8WVM8 642 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 ATP2A3Q93084 1043 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 MYLPFQ96A32 169 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 EXOC4Q96A65 974 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 SPATA32Q96LK8 384 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 TTLL2Q9BWV7 592 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 LRRC27Q9C0I9 530 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 SLC39A2Q9NP94 309 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 EBF1Q9UH73 591 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 R3HCC1Q9Y3T6 440 aaKnown RBP16.06■□□□□ 0.16
LTBP3-206ENST00000526825 ABCA7Q8IZY2 2146 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 EML5Q05BV3 1969 aa16.06■□□□□ 0.16
LTBP3-206ENST00000526825 CLIC2O15247 247 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 PFKLP17858 780 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 GNL1P36915 607 aaPredicted RBP16.05■□□□□ 0.16
LTBP3-206ENST00000526825 GRIK1P39086 918 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 AMPD3Q01432 767 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 NR1H3Q13133 447 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 DENND5BQ6ZUT9 1274 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 STXBP4Q6ZWJ1 553 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 ADGRG2Q8IZP9 1017 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 RDH13Q8NBN7 331 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 MYCBPAPQ8TBZ2 947 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 PCED1BQ96HM7 432 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 HHIPQ96QV1 700 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
LTBP3-206ENST00000526825 RNF38Q9H0F5 515 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 DUSP15Q9H1R2 295 aaPredicted RBP16.05■□□□□ 0.16
LTBP3-206ENST00000526825 GOLPH3LQ9H4A5 285 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 PCDHGA5Q9Y5G8 931 aa16.05■□□□□ 0.16
LTBP3-206ENST00000526825 MAP1BP46821 2468 aaKnown RBP16.05■□□□□ 0.16
LTBP3-206ENST00000526825 KMT2BQ9UMN6 2715 aaPredicted RBP16.04■□□□□ 0.16
LTBP3-206ENST00000526825 ZNF840PA6NDX5 716 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 EIF3DO15371 548 aaKnown RBP eCLIP16.04■□□□□ 0.16
LTBP3-206ENST00000526825 TACC1O75410 805 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 OPRD1P41143 372 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 CYP2J2P51589 502 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 KRT85P78386 507 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 DMC1Q14565 340 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 KCNB1Q14721 858 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 TTC16Q8NEE8 873 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 DDX1Q92499 740 aaKnown RBP16.04■□□□□ 0.16
LTBP3-206ENST00000526825 ZNF516Q92618 1163 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 C8orf48Q96LL4 319 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
LTBP3-206ENST00000526825 MAGEF1Q9HAY2 307 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 TRPM5Q9NZQ8 1165 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
LTBP3-206ENST00000526825 ANTXRLA6NF34 631 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 K7EQS6 105 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 LEFTY2O00292 366 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 DCLK1O15075 740 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 APBB3O95704 486 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 OLFM2O95897 454 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 PTPN1P18031 435 aaKnown RBP16.03■□□□□ 0.16
LTBP3-206ENST00000526825 CMA1P23946 247 aa16.03■□□□□ 0.16
LTBP3-206ENST00000526825 PPP3CCP48454 512 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms