RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 MYRIPQ8NFW9 859 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 MYLPFQ96A32 169 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 ANKRD36BP1Q96IX9 119 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 PKMYT1Q99640 499 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 EDEM2Q9BV94 578 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 FBRSL1Q9HCM7 1045 aaKnown RBP12.56□□□□□ -0.4
CAPN1-204ENST00000526468 PDE11AQ9HCR9 933 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 OLFML3Q9NRN5 406 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 VPS45Q9NRW7 570 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 FBXO2Q9UK22 296 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-204ENST00000526468 GTF3C4Q9UKN8 822 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 CLIC4Q9Y696 253 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 ZFYVE26Q68DK2 2539 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 FRYQ5TBA9 3013 aa12.56□□□□□ -0.4
CAPN1-204ENST00000526468 C2orf78A6NCI8 922 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 NFATC1O95644 943 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 TNNC2P02585 160 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 ANXA13P27216 316 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 LHX1P48742 406 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 GALK1P51570 392 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 SEC13P55735 322 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 RBP5P82980 135 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 MYO1EQ12965 1108 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 SYCP1Q15431 976 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 EML3Q32P44 896 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 PLA2G2CQ5R387 149 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 SYT13Q7L8C5 426 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 GAS2L3Q86XJ1 694 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 GPD1LQ8N335 351 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 SPATA18Q8TC71 538 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 FUBP3Q96I24 572 aaKnown RBP eCLIP12.55□□□□□ -0.4
CAPN1-204ENST00000526468 MYRFLQ96LU7 910 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 STRA6Q9BX79 667 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 TPSD1Q9BZJ3 242 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 SIX4Q9UIU6 781 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 ATP6V1DQ9Y5K8 247 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 PTPRJQ12913 1337 aa12.55□□□□□ -0.4
CAPN1-204ENST00000526468 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
CAPN1-204ENST00000526468 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 DCLK1O15075 740 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 RHOBTB1O94844 696 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 CLSTN1O94985 981 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 PDCP20941 246 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 PDE6CP51160 858 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 DGKEP52429 567 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 CYP27A1Q02318 531 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 N4BP2L1Q5TBK1 243 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-204ENST00000526468 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 ANO7Q6IWH7 933 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 CXorf38Q8TB03 319 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 EZH1Q92800 747 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-204ENST00000526468 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 ZC3H10Q96K80 434 aaKnown RBP12.54□□□□□ -0.4
CAPN1-204ENST00000526468 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 DUSP15Q9H1R2 295 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-204ENST00000526468 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 GDAP2Q9NXN4 497 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 PKD1L2Q7Z442 2459 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 CKAP5Q14008 2032 aa12.54□□□□□ -0.4
CAPN1-204ENST00000526468 ATP2C2O75185 946 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
CAPN1-204ENST00000526468 PTMAP06454 111 aaKnown RBP12.53□□□□□ -0.4
CAPN1-204ENST00000526468 PMLP29590 882 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 MAGEA11P43364 429 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 DMTNQ08495 405 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 NR1H3Q13133 447 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 SOWAHAQ2M3V2 549 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 PSAPL1Q6NUJ1 521 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 STXBP4Q6ZWJ1 553 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 OR5B17Q8NGF7 314 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 KBTBD7Q8WVZ9 684 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 TSPY26PQ9H489 355 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 GCNT4Q9P109 453 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 MAGEC2Q9UBF1 373 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-204ENST00000526468 CDH9Q9ULB4 789 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 SRPRBQ9Y5M8 271 aaKnown RBP12.53□□□□□ -0.4
CAPN1-204ENST00000526468 TMEM131Q92545 1883 aa12.53□□□□□ -0.4
CAPN1-204ENST00000526468 A0A087X0B3 334 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 GABRDO14764 452 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
CAPN1-204ENST00000526468 TRIM66O15016 1216 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 KCNK5O95279 499 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CYP17A1P05093 508 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 HDCP19113 662 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 BDNFP23560 247 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 GRIK1P39086 918 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 NOVA1P51513 510 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms