RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 UBASH3AP57075 661 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 MAP3K7CLP57077 242 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 ZP2Q05996 745 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
SMPD1-202ENST00000526280 CNGA2Q16280 664 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 TAF12Q16514 161 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 CLEC20AQ6ZU45 233 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 GAREM2Q75VX8 874 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 OTOP3Q7RTS5 596 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 ANKRD52Q8NB46 1076 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 STKLD1Q8NE28 680 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 NEK11Q8NG66 645 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 TRMT2BQ96GJ1 504 aaKnown RBP13.69□□□□□ -0.22
SMPD1-202ENST00000526280 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 MYRFLQ96LU7 910 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 PCMTD1Q96MG8 357 aaPredicted RBP13.69□□□□□ -0.22
SMPD1-202ENST00000526280 ZSWIM1Q9BR11 485 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 MRPS23Q9Y3D9 190 aaKnown RBP13.69□□□□□ -0.22
SMPD1-202ENST00000526280 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 MYH10P35580 1976 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 GREB1Q4ZG55 1949 aa13.69□□□□□ -0.22
SMPD1-202ENST00000526280 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 LOC730098B7Z3J9 87 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 NRG2O14511 850 aaPredicted RBP13.68□□□□□ -0.22
SMPD1-202ENST00000526280 TNFRSF10BO14763 440 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 CYP26A1O43174 497 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 MOSPD3O75425 235 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 FGF19O95750 216 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 CALCAP01258 141 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
SMPD1-202ENST00000526280 STILQ15468 1287 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 DENND5BQ6ZUT9 1274 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 GET4Q7L5D6 327 aaPredicted RBP13.68□□□□□ -0.22
SMPD1-202ENST00000526280 TTC30AQ86WT1 665 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 NUP93Q8N1F7 819 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 MYADMQ96S97 322 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 TTLL2Q9BWV7 592 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 UBXN6Q9BZV1 441 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 IL21Q9HBE4 155 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 IL37Q9NZH6 218 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 MAGED2Q9UNF1 606 aaPredicted RBP13.68□□□□□ -0.22
SMPD1-202ENST00000526280 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
SMPD1-202ENST00000526280 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 HHLA1C9JL84 531 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 F8VZ95 297 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 F11P03951 625 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 PNMA6AP0CW24 399 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 BRD2P25440 801 aaKnown RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 GABRR2P28476 465 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 CDC25CP30307 473 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 CLCN1P35523 988 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 JAM2P57087 298 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 USP46P62068 366 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 PTK2Q05397 1052 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 GOLGA7BQ2TAP0 167 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 PKDCCQ504Y2 493 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 TMEM150AQ86TG1 271 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 SHKBP1Q8TBC3 707 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 ZNF606Q8WXB4 792 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 FGF13Q92913 245 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 ACSF2Q96CM8 615 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 PNPLA8Q9NP80 782 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 ACP6Q9NPH0 428 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 NLRC4Q9NPP4 1024 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 COMMD8Q9NX08 183 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 IFNKQ9P0W0 207 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 HESX1Q9UBX0 185 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 CDH7Q9ULB5 785 aa13.67□□□□□ -0.22
SMPD1-202ENST00000526280 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 ZFP37Q9Y6Q3 630 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-202ENST00000526280 A0A1W2PRU2 124 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
SMPD1-202ENST00000526280 LAMP2P13473 410 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 GJA1P17302 382 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 CEBPBP17676 345 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 GNA15P30679 374 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 GBP2P32456 591 aaPredicted RBP13.66□□□□□ -0.22
SMPD1-202ENST00000526280 PBX1P40424 430 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 SLC5A3P53794 718 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 BCAT1P54687 386 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 SLC8A3P57103 927 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 BPIFB4P59827 614 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 BST2Q10589 180 aaKnown RBP13.66□□□□□ -0.22
SMPD1-202ENST00000526280 POTEHQ6S545 545 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 NPAS3Q8IXF0 933 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 ZDHHC14Q8IZN3 488 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
SMPD1-202ENST00000526280 TDRD5Q8NAT2 981 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms