RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
LMX1B-203ENST00000526117 ECI2O75521 394 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 TADA3O75528 432 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 VDRP11473 427 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 NPR3P17342 541 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 CDR1P51861 262 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 MFAP3P55082 362 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 TDGQ13569 410 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 MTMR3Q13615 1198 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 STILQ15468 1287 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 TEAD2Q15562 447 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 MEA1Q16626 185 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 ZNF394Q53GI3 561 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 HSP90AA4PQ58FG1 418 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 PPP1R26Q5T8A7 1209 aaPredicted RBP18.29■□□□□ 0.52
LMX1B-203ENST00000526117 SDHAF4Q5VUM1 108 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 POTEHQ6S545 545 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 CLEC20AQ6ZU45 233 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 NUP93Q8N1F7 819 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 GPR152Q8TDT2 470 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 ING5Q8WYH8 240 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 KAT5Q92993 513 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 E2F7Q96AV8 911 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 ELSPBP1Q96BH3 223 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
LMX1B-203ENST00000526117 SMOQ99835 787 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 CRACR2AQ9BSW2 395 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 DUSP16Q9BY84 665 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 ATXN3LQ9H3M9 355 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 TASP1Q9H6P5 420 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 PLCB1Q9NQ66 1216 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 MUTYHQ9UIF7 546 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 DENND4CQ5VZ89 1909 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 OBSL1O75147 1896 aa18.29■□□□□ 0.52
LMX1B-203ENST00000526117 NUP210Q8TEM1 1887 aaPredicted RBP18.29■□□□□ 0.52
LMX1B-203ENST00000526117 FCARP24071 287 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 IQCB1Q15051 598 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 NFKBIBQ15653 356 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 SGO2Q562F6 1265 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 TMEM270Q6UE05 265 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 RRAGAQ7L523 313 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 APTXQ7Z2E3 356 aaKnown RBP18.28■□□□□ 0.52
LMX1B-203ENST00000526117 ANKRD52Q8NB46 1076 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 SHC3Q92529 594 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 SMARCD2Q92925 531 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 KHSRPQ92945 711 aaKnown RBP eCLIP18.28■□□□□ 0.52
LMX1B-203ENST00000526117 KCNK16Q96T55 309 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 UBE2TQ9NPD8 197 aaPredicted RBP18.28■□□□□ 0.52
LMX1B-203ENST00000526117 OBP2AQ9NY56 170 aa18.28■□□□□ 0.52
LMX1B-203ENST00000526117 LGALS16A8MUM7 142 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 HHLA1C9JL84 531 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 PDE6CP51160 858 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 COPB1P53618 953 aaKnown RBP18.27■□□□□ 0.52
LMX1B-203ENST00000526117 SLC5A3P53794 718 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 USP46P62068 366 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 ZXDAP98168 799 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 KCNMA1Q12791 1236 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 FAM78AQ5JUQ0 283 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 SNX30Q5VWJ9 437 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 PARM1Q6UWI2 310 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 RBBP8NLQ8NC74 664 aaPredicted RBP18.27■□□□□ 0.52
LMX1B-203ENST00000526117 MRPS31Q92665 395 aaKnown RBP18.27■□□□□ 0.52
LMX1B-203ENST00000526117 EDAQ92838 391 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 FGF14Q92915 247 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 MCRS1Q96EZ8 462 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 FBXO44Q9H4M3 255 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 TAB2Q9NYJ8 693 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 MAGED2Q9UNF1 606 aaPredicted RBP18.27■□□□□ 0.52
LMX1B-203ENST00000526117 DUSP12Q9UNI6 340 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 PCDHB4Q9Y5E5 795 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 NUMBLQ9Y6R0 609 aa18.27■□□□□ 0.52
LMX1B-203ENST00000526117 O00370 1275 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 BEST1O76090 585 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 ASGR2P07307 311 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 ADORA2BP29275 332 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 BCAT1P54687 386 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 MAP3K7CLP57077 242 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 CNGA2Q16280 664 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 PKDCCQ504Y2 493 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 FKBP15Q5T1M5 1219 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 GPR158Q5T848 1215 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 LCLAT1Q6UWP7 414 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 MON1AQ86VX9 555 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 SLC44A3Q8N4M1 653 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 ZSCAN18Q8TBC5 510 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-203ENST00000526117 ZSWIM3Q96MP5 696 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 SLITRK1Q96PX8 696 aa18.26■□□□□ 0.51
LMX1B-203ENST00000526117 RNF225M0QZC1 329 aaPredicted RBP18.25■□□□□ 0.51
LMX1B-203ENST00000526117 ZDHHC11BP0C7U3 371 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 SETSIPP0DME0 302 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 SRFP11831 508 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 GJA1P17302 382 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 CDK11BP21127 795 aaKnown RBP18.25■□□□□ 0.51
LMX1B-203ENST00000526117 YWHAQP27348 245 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 TUBP50607 506 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 SLC8A3P57103 927 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 ZNF268Q14587 947 aaPredicted RBP18.25■□□□□ 0.51
LMX1B-203ENST00000526117 KLHDC7AQ5VTJ3 777 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms