RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 LRRC3Q9BY71 257 aa21.97■■□□□ 1.11
CD44-222ENST00000526025 NLRC4Q9NPP4 1024 aa21.97■■□□□ 1.11
CD44-222ENST00000526025 ASAH2Q9NR71 780 aa21.97■■□□□ 1.11
CD44-222ENST00000526025 UXTQ9UBK9 157 aaPredicted RBP21.97■■□□□ 1.11
CD44-222ENST00000526025 HESX1Q9UBX0 185 aa21.97■■□□□ 1.11
CD44-222ENST00000526025 SLC38A8A6NNN8 435 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 ZNF197O14709 1029 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 CYP26A1O43174 497 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 RHOP08100 348 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 SETSIPP0DME0 302 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 HMGA1P17096 107 aaKnown RBP21.96■■□□□ 1.11
CD44-222ENST00000526025 BRD2P25440 801 aaKnown RBP21.96■■□□□ 1.11
CD44-222ENST00000526025 STAT1P42224 750 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 CDR1P51861 262 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 GOLGA7BQ2TAP0 167 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 CYP4A22Q5TCH4 519 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 DENND5BQ6ZUT9 1274 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 CACNA2D4Q7Z3S7 1137 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 GRASPQ7Z6J2 395 aaPredicted RBP21.96■■□□□ 1.11
CD44-222ENST00000526025 TMC8Q8IU68 726 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 ZMIZ2Q8NF64 920 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 ZSWIM1Q9BR11 485 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 IL37Q9NZH6 218 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 ANAPC1Q9H1A4 1944 aa21.96■■□□□ 1.11
CD44-222ENST00000526025 A0A1W2PQJ5 194 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 TNFRSF10BO14763 440 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 RTN3O95197 1032 aaPredicted RBP21.95■■□□□ 1.1
CD44-222ENST00000526025 BST2Q10589 180 aaKnown RBP21.95■■□□□ 1.1
CD44-222ENST00000526025 TAF12Q16514 161 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 PRSS36Q5K4E3 855 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 PDZD4Q76G19 769 aaPredicted RBP21.95■■□□□ 1.1
CD44-222ENST00000526025 TTC30AQ86WT1 665 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 NUP93Q8N1F7 819 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 FEZF2Q8TBJ5 459 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 GIPC2Q8TF65 315 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 ZNF606Q8WXB4 792 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 BAP1Q92560 729 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 ASB2Q96Q27 587 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 KCNK16Q96T55 309 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 CORO1BQ9BR76 489 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 POMKQ9H5K3 350 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 HCFC1R1Q9NWW0 138 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 PRKAG3Q9UGI9 489 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 PCDHGC3Q9UN70 934 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 USTQ9Y2C2 406 aa21.95■■□□□ 1.1
CD44-222ENST00000526025 MYO16Q9Y6X6 1858 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 HHLA1C9JL84 531 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 XPO1O14980 1071 aaKnown RBP21.94■■□□□ 1.1
CD44-222ENST00000526025 THAP12O43422 761 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 BEST1O76090 585 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 MAP3K7CLP57077 242 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 SDHAF4Q5VUM1 108 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 ZNF677Q86XU0 584 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 PHF7Q9BWX1 381 aaPredicted RBP21.94■■□□□ 1.1
CD44-222ENST00000526025 ZMYM5Q9UJ78 669 aa21.94■■□□□ 1.1
CD44-222ENST00000526025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.94■■□□□ 1.1
CD44-222ENST00000526025 ZFP37Q9Y6Q3 630 aaPredicted RBP21.94■■□□□ 1.1
CD44-222ENST00000526025 FAM92AA1XBS5 289 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 SOBPA7XYQ1 873 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 NCANO14594 1321 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 CCDC172P0C7W6 258 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 PNMA6AP0CW24 399 aaPredicted RBP21.93■■□□□ 1.1
CD44-222ENST00000526025 CYP11B1P15538 503 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 FSHRP23945 695 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 CDC25CP30307 473 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 PLA2G4AP47712 749 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 PPP3CCP48454 512 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 SLC47A2Q86VL8 602 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 OVCA2Q8WZ82 227 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 NUCKS1Q9H1E3 243 aaKnown RBP21.93■■□□□ 1.1
CD44-222ENST00000526025 IL21Q9HBE4 155 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.93■■□□□ 1.1
CD44-222ENST00000526025 CDH22Q9UJ99 828 aa21.93■■□□□ 1.1
CD44-222ENST00000526025 M0QYV0 167 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 PDE6CP51160 858 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 SLC5A3P53794 718 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 PDE4CQ08493 712 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 TRIM14Q14142 442 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 RAB41Q5JT25 222 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 SPECC1LQ69YQ0 1117 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 VSTM4Q8IW00 320 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.92■■□□□ 1.1
CD44-222ENST00000526025 HS6ST3Q8IZP7 471 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 GPR152Q8TDT2 470 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 EPS8L1Q8TE68 723 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 STK32AQ8WU08 396 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 SLC35F5Q8WV83 523 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 KCTD13Q8WZ19 329 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 TRIM5Q9C035 493 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 LHX5Q9H2C1 402 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 FBXO44Q9H4M3 255 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 ZNF334Q9HCZ1 680 aaPredicted RBP21.92■■□□□ 1.1
CD44-222ENST00000526025 ACP6Q9NPH0 428 aa21.92■■□□□ 1.1
CD44-222ENST00000526025 MRPS23Q9Y3D9 190 aaKnown RBP21.92■■□□□ 1.1
CD44-222ENST00000526025 NUP210Q8TEM1 1887 aaPredicted RBP21.92■■□□□ 1.1
CD44-222ENST00000526025 GFPT2O94808 682 aa21.91■■□□□ 1.1
CD44-222ENST00000526025 SLC34A2O95436 690 aa21.91■■□□□ 1.1
CD44-222ENST00000526025 BMP1P13497 986 aa21.91■■□□□ 1.1
CD44-222ENST00000526025 IL9P15248 144 aa21.91■■□□□ 1.1
CD44-222ENST00000526025 FERP16591 822 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms