RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 IQCDQ96DY2 449 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 ZC3H10Q96K80 434 aaKnown RBP5.28□□□□□ -1.56
CD44-215ENST00000525241 COLEC11Q9BWP8 271 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 TRIM5Q9C035 493 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 SYNPO2LQ9H987 977 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 GBA2Q9HCG7 927 aaPredicted RBP5.28□□□□□ -1.56
CD44-215ENST00000525241 DKK4Q9UBT3 224 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 CAPN11Q9UMQ6 739 aa5.28□□□□□ -1.56
CD44-215ENST00000525241 WDR33Q9C0J8 1336 aaKnown RBP5.27□□□□□ -1.57
CD44-215ENST00000525241 A0A1W2PPC4 97 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 CCDC151A5D8V7 595 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 ZAR1LA6NP61 321 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 RASA4BC9J798 803 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 MGST3O14880 152 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 RASA4O43374 803 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 PLIN1O60240 522 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 A1BGP04217 495 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 IL6RP08887 468 aaPredicted RBP5.27□□□□□ -1.57
CD44-215ENST00000525241 NR2F6P10588 404 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 ZFXP17010 805 aaPredicted RBP5.27□□□□□ -1.57
CD44-215ENST00000525241 CXCR5P32302 372 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 CPT1AP50416 773 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 LY6KQ17RY6 165 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 ZNF750Q32MQ0 723 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 PRR16Q569H4 304 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 TREML2Q5T2D2 321 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 SYCP2LQ5T4T6 812 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 ZNF618Q5T7W0 954 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 DEPDC1Q5TB30 811 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 CACHD1Q5VU97 1274 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 PLAG1Q6DJT9 500 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 RNF44Q7L0R7 432 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 CCDC33Q8N5R6 958 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 DNAJB14Q8TBM8 379 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 TMEM171Q8WVE6 324 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 OSCP1Q8WVF1 389 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 IPCEF1Q8WWN9 437 aaPredicted RBP5.27□□□□□ -1.57
CD44-215ENST00000525241 ATRIPQ8WXE1 791 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 GLG1Q92896 1179 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 RIPOR3Q96MK2 946 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 ZNF700Q9H0M5 742 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 STARD7Q9NQZ5 370 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 GJB4Q9NTQ9 266 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 TBC1D23Q9NUY8 699 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 FNIP2Q9P278 1114 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 ZNF212Q9UDV6 495 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 SNX14Q9Y5W7 946 aa5.27□□□□□ -1.57
CD44-215ENST00000525241 A1L4Q6 167 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 LINC00473A8K010 186 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 THAP12O43422 761 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 NCK2O43639 380 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 SRGAP2O75044 1071 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 RASAL1O95294 804 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 JUPP14923 745 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 FGFR2P21802 821 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 TNFSF4P23510 183 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 CLCN2P51788 898 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 HMGA2P52926 109 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 CCNIQ14094 377 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 FAM209BQ5JX69 171 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 CERCAMQ5T4B2 595 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 TEDDM1Q5T9Z0 273 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 IZUMO1Q8IYV9 350 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 SPARTQ8N0X7 666 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 OR2C3Q8N628 320 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 VGLL2Q8N8G2 317 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 SIMC1Q8NDZ2 872 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 SLC39A13Q96H72 371 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 CCDC138Q96M89 665 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 AS3MTQ9HBK9 375 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 GLOD4Q9HC38 313 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 SERTAD4Q9NUC0 356 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 MYO1AQ9UBC5 1043 aa5.26□□□□□ -1.57
CD44-215ENST00000525241 A0A087WZ62 844 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 CLCA1A8K7I4 914 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 APOL1O14791 398 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 AREL1O15033 823 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 CD3EAPO15446 510 aaKnown RBP5.25□□□□□ -1.57
CD44-215ENST00000525241 RGS10O43665 173 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 URI1O94763 535 aaPredicted RBP5.25□□□□□ -1.57
CD44-215ENST00000525241 INMTO95050 263 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 NXPH3O95157 252 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 LMNAP02545 664 aaKnown RBP5.25□□□□□ -1.57
CD44-215ENST00000525241 FESP07332 822 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 TPH1P17752 444 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 CLK3P49761 638 aaKnown RBP5.25□□□□□ -1.57
CD44-215ENST00000525241 ITGA8P53708 1063 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 BCAT1P54687 386 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 UBE4AQ14139 1066 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 RRAGBQ5VZM2 374 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 SLC9A4Q6AI14 798 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 HIBCHQ6NVY1 386 aaPredicted RBP5.25□□□□□ -1.57
CD44-215ENST00000525241 SOCS4Q8WXH5 440 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 MYD88Q99836 296 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 C17orf80Q9BSJ5 609 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 FAM83DQ9H4H8 585 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 ARHGEF3Q9NR81 526 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 TRMT13Q9NUP7 481 aaKnown RBP5.25□□□□□ -1.57
CD44-215ENST00000525241 SLC52A1Q9NWF4 448 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 PADI4Q9UM07 663 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms