RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 USP17L7P0C7H9 530 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ASPAP45381 313 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 GCLMP48507 274 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 SPATA20Q8TB22 786 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 SLC22A12Q96S37 553 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 GKN1Q9NS71 199 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 PCDHA5Q9Y5H7 936 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 LAMTOR5O43504 91 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 CTHP32929 405 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 NOP14P78316 857 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 TNK2Q07912 1038 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 USP4Q13107 963 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ITPRIPL2Q3MIP1 535 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 C1orf228Q6PIY5 440 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 PAQR9Q6ZVX9 377 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ASCL5Q7RTU5 278 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ACOT1Q86TX2 421 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 RALGPS2Q86X27 583 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZC3H3Q8IXZ2 948 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 TAS1R2Q8TE23 839 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 TNIP3Q96KP6 325 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 TSG101Q99816 390 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 FAM83CQ9BQN1 747 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 MED10Q9BTT4 135 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 CHRDQ9H2X0 955 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 MMRN2Q9H8L6 949 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 APOBEC3GQ9HC16 384 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 TMEM8AQ9HCN3 771 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 HPS4Q9NQG7 708 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 EHD2Q9NZN4 543 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 TRPM5Q9NZQ8 1165 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 HMGXB4Q9UGU5 601 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 HOOK1Q9UJC3 728 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 FBXO4Q9UKT5 387 aa11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-204ENST00000524797 C2orf78A6NCI8 922 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 CETN3O15182 167 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 CHRNB1P11230 501 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 GTF2H1P32780 548 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 NDST1P52848 882 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 ORC1Q13415 861 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZNF77Q15935 545 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 WDR44Q5JSH3 913 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 UNC93AQ86WB7 457 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 ADSSL1Q8N142 457 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 ARL14EPQ8N8R7 260 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 CYP2S1Q96SQ9 504 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 IER2Q9BTL4 223 aa11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 GTPBP4Q9BZE4 634 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 PRMT8Q9NR22 394 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-204ENST00000524797 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 CKMP06732 381 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 ARSAP15289 507 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 TCF3P15923 654 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 PFKLP17858 780 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 MTAPQ13126 283 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 MTF1Q14872 753 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZNF528Q3MIS6 628 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 FUKQ8N0W3 1084 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 CRYBG2Q8N1P7 616 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 SMARCD1Q96GM5 515 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 IMPG2Q9BZV3 1241 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 NIF3L1Q9GZT8 377 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 R4GN57 208 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZNF840PA6NDX5 716 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 AP1G2O75843 785 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 CCDC130P13994 396 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 HDCP19113 662 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 PPP3CCP48454 512 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 PDE6CP51160 858 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 PMS1P54277 932 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 INCA1Q0VD86 236 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 TAF10Q12962 218 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 RUNX3Q13761 415 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 LRRC32Q14392 662 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 PON2Q15165 354 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 KRT39Q6A163 491 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 CC2D1AQ6P1N0 951 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms