RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TRAPPC12Q8WVT3 735 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 HAS1Q92839 578 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 LENG9Q96B70 501 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 MOGAT1Q96PD6 335 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 PRPF18Q99633 342 aaKnown RBP6.85□□□□□ -1.31
SKP1-213ENST00000524288 NAP1L4Q99733 375 aaKnown RBP6.85□□□□□ -1.31
SKP1-213ENST00000524288 ISCA1Q9BUE6 129 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 TMEM120AQ9BXJ8 343 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 EIF2AQ9BY44 585 aaKnown RBP6.85□□□□□ -1.31
SKP1-213ENST00000524288 CTTNBP2NLQ9P2B4 639 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 A0A1B0GTW7 788 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 TMEM191CA6NGB0 347 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 RGS10O43665 173 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 PIAS2O75928 621 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 USP1O94782 785 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 SUN1O94901 812 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 ATXN1LP0C7T5 689 aaKnown RBP6.84□□□□□ -1.31
SKP1-213ENST00000524288 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.31
SKP1-213ENST00000524288 GYS1P13807 737 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 CCT5P48643 541 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 PXNP49023 591 aaPredicted RBP6.84□□□□□ -1.31
SKP1-213ENST00000524288 OCA2Q04671 838 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 POU5F1BQ06416 359 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 NPY5RQ15761 445 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 PTCHD3Q3KNS1 767 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 MGAT5BQ3V5L5 792 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 PDCD4Q53EL6 469 aaKnown RBP6.84□□□□□ -1.31
SKP1-213ENST00000524288 TMTC4Q5T4D3 741 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 SULT6B1Q6IMI4 303 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 KIAA0408Q6ZU52 694 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 CCDC28AQ8IWP9 274 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 FAM71BQ8TC56 605 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 TRPM5Q9NZQ8 1165 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 PNMA2Q9UL42 364 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 SHOC2Q9UQ13 582 aa6.84□□□□□ -1.31
SKP1-213ENST00000524288 MTO1Q9Y2Z2 717 aaKnown RBP6.84□□□□□ -1.31
SKP1-213ENST00000524288 IPO5O00410 1097 aaKnown RBP6.83□□□□□ -1.32
SKP1-213ENST00000524288 SRGAP2O75044 1071 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 ZFPL1O95159 310 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 GPANK1O95872 356 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 AGR2O95994 175 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 CYP2C9P11712 490 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 PRKAG1P54619 331 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 LOXL3P58215 753 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 PTK2BQ14289 1009 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 INSCQ1MX18 579 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
SKP1-213ENST00000524288 PREPLQ4J6C6 727 aaPredicted RBP6.83□□□□□ -1.32
SKP1-213ENST00000524288 ALFQ53S48 1182 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 ZNF627Q7L945 461 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 KRT28Q7Z3Y7 464 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 SYNE4Q8N205 404 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 ZNF276Q8N554 614 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 POC1BQ8TC44 478 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 TMEM171Q8WVE6 324 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 GCC1Q96CN9 775 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 NELL2Q99435 816 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 RNPEPQ9H4A4 650 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 EPS8L2Q9H6S3 715 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 CXorf36Q9H7Y0 433 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 NRDE2Q9H7Z3 1164 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 DNMT3BQ9UBC3 853 aaKnown RBP6.83□□□□□ -1.32
SKP1-213ENST00000524288 SORCS3Q9UPU3 1222 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 MAP3K2Q9Y2U5 619 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 CDY1Q9Y6F8 540 aa6.83□□□□□ -1.32
SKP1-213ENST00000524288 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 TRIM24O15164 1050 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 CCP110O43303 1012 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 RAMP2O60895 175 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 RECQL4O94761 1208 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 INMTO95050 263 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 LMNAP02545 664 aaKnown RBP6.82□□□□□ -1.32
SKP1-213ENST00000524288 ELANEP08246 267 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 DHRS4L1P0CG22 281 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 IDEP14735 1019 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 EGR1P18146 543 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 MYO1EQ12965 1108 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 RALBP1Q15311 655 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 PRR16Q569H4 304 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.82□□□□□ -1.32
SKP1-213ENST00000524288 ARHGAP40Q5TG30 622 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 FOXR2Q6PJQ5 311 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 PCSK4Q6UW60 755 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 RHOUQ7L0Q8 258 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 MRGPREQ86SM8 312 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.82□□□□□ -1.32
SKP1-213ENST00000524288 DNAJB14Q8TBM8 379 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 SMCR8Q8TEV9 937 aaPredicted RBP6.82□□□□□ -1.32
SKP1-213ENST00000524288 PPP2R3CQ969Q6 453 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 TMEM125Q96AQ2 219 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
SKP1-213ENST00000524288 SLC46A2Q9BY10 475 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 CASS4Q9NQ75 786 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 XPNPEP3Q9NQH7 507 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 NECTIN3Q9NQS3 549 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 DKK4Q9UBT3 224 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 FZD1Q9UP38 647 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 LZTS1Q9Y250 596 aa6.82□□□□□ -1.32
SKP1-213ENST00000524288 HPSEQ9Y251 543 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms