RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 KIAA1958Q8N8K9 716 aa22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 OVCA2Q8WZ82 227 aa22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 HNRNPABQ99729 332 aaKnown RBP22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 NUP62CLQ9H1M0 184 aa22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 DMAP1Q9NPF5 467 aaPredicted RBP22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 MAGED2Q9UNF1 606 aaPredicted RBP22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 TICRRQ7Z2Z1 1910 aa22.19■■□□□ 1.14
TRAPPC9-215ENST00000524162 FAM92AA1XBS5 289 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 ARNTLO00327 626 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 CCDC192P0DO97 292 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 PRKCSHP14314 528 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 AVPR1AP37288 418 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 VIPR2P41587 438 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 CYP4F8P98187 520 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 PLCB2Q00722 1185 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 MLF2Q15773 248 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 ARHGAP29Q52LW3 1261 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 NUP93Q8N1F7 819 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 WHAMMQ8TF30 809 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 MSANTD3Q96H12 275 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 NELL2Q99435 816 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 BRD9Q9H8M2 597 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 PNPLA8Q9NP80 782 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 TMEM30AQ9NV96 361 aa22.18■■□□□ 1.14
TRAPPC9-215ENST00000524162 DPYSL4O14531 572 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 ZNF263O14978 683 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 TCF3P15923 654 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 TBXAS1P24557 533 aaPredicted RBP22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 YWHAEP62258 255 aaKnown RBP22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 PDZD8Q8NEN9 1154 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 ELMO3Q96BJ8 720 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 SRRTQ9BXP5 876 aaKnown RBP22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 TDP1Q9NUW8 608 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 HMGXB4Q9UGU5 601 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 DACH1Q9UI36 760 aa22.17■■□□□ 1.14
TRAPPC9-215ENST00000524162 TNFRSF10BO14763 440 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 LRRN2O75325 713 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 ERCC5P28715 1186 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 CACNA2D1P54289 1103 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 VCPP55072 806 aaKnown RBP22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 SNX30Q5VWJ9 437 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 MAB21L3Q8N8X9 362 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 ST13P5Q8NFI4 369 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 BPIFB1Q8TDL5 484 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 RSPRY1Q96DX4 576 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 SLITRK1Q96PX8 696 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 IRF2BPLQ9H1B7 796 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 TBC1D17Q9HA65 648 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 CISHQ9NSE2 258 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 TRPM5Q9NZQ8 1165 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 CA14Q9ULX7 337 aa22.16■■□□□ 1.14
TRAPPC9-215ENST00000524162 CLDN5O00501 218 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 MAN2B1O00754 1011 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 PRAMEF12O95522 483 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 USP17L7P0C7H9 530 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 GDI1P31150 447 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 STX17P56962 302 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 USP46P62068 366 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 CUL2Q13617 745 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 TXNDC8Q6A555 127 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 RBM43Q6ZSC3 357 aaKnown RBP22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 YAF2Q8IY57 180 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 TMEM105Q8N8V8 129 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 SLC2A14Q8TDB8 520 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 CYFIP2Q96F07 1278 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 TWNKQ96RR1 684 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 MED10Q9BTT4 135 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 KRT82Q9NSB4 513 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 THG1LQ9NWX6 298 aaKnown RBP22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 GCNT4Q9P109 453 aa22.15■■□□□ 1.14
TRAPPC9-215ENST00000524162 CACNA1IQ9P0X4 2223 aa22.14■■□□□ 1.14
TRAPPC9-215ENST00000524162 TRAV19A0A0A6YYK7 116 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 KANSL1LA0AUZ9 987 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 AP1G2O75843 785 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 OLFM2O95897 454 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 YWHAQP27348 245 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 MAGEA9P43362 315 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 GRM2Q14416 872 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 C12orf29Q8N999 325 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 FLCNQ8NFG4 579 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 LMO3Q8TAP4 145 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 USP13Q92995 863 aaPredicted RBP22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 TATDN2Q93075 761 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 LRRC3BQ96PB8 259 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 MED15Q96RN5 788 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 KCNK16Q96T55 309 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 FBXO44Q9H4M3 255 aa22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 MRPS17Q9Y2R5 130 aaKnown RBP22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.14■■□□□ 1.13
TRAPPC9-215ENST00000524162 ZNF840PA6NDX5 716 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 GALR2O43603 387 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 AFPP02771 609 aaKnown RBP22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 FAM200BP0CF97 657 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 CCDC130P13994 396 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 TUBP50607 506 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 KCNH2Q12809 1159 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 ARHGAP17Q68EM7 881 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 STKLD1Q8NE28 680 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 ZMIZ2Q8NF64 920 aa22.13■■□□□ 1.13
TRAPPC9-215ENST00000524162 PJA1Q8NG27 643 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms