RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 TMEM120AQ9BXJ8 343 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 EIF2AQ9BY44 585 aaKnown RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 Q9H521 79 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 VPS37BQ9H9H4 285 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 TMOD2Q9NZR1 351 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SERPINA10Q9UK55 444 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 JAG2Q9Y219 1238 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 AK5Q9Y6K8 562 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SLC30A1Q9Y6M5 507 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 ANK1P16157 1881 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 DENND3A2RUS2 1198 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 UNGP13051 313 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 MAGEA4P43358 317 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 CCR3P51677 355 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 FAM47AQ5JRC9 791 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 FAM182BQ5T319 152 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SNRNP48Q6IEG0 339 aaKnown RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 LVRNQ6Q4G3 990 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 TMEM102Q8N9M5 508 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 ICA1LQ8NDH6 482 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 CNDP1Q96KN2 507 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 DHRS1Q96LJ7 313 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SNCAIPQ9Y6H5 919 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 GAKO14976 1311 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CYP2D7A0A087X1C5 515 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 FCHO1O14526 889 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ENO1P06733 434 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CTBSQ01459 385 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 PKN2Q16513 984 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ZNF829Q3KNS6 432 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CCNJQ5T5M9 372 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ISLR2Q6UXK2 745 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GSDMBQ8TAX9 411 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SLC26A7Q8TE54 656 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 C1orf54Q8WWF1 131 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CASP10Q92851 521 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 EME1Q96AY2 570 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 LENG9Q96B70 501 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 APOPT1Q96IL0 206 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ANO3Q9BYT9 981 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GIT1Q9Y2X7 761 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SPECC1L-ADORA2AF8WAN1 911 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 TRPA1O75762 1119 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SERPINB2P05120 415 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 TCF7P36402 384 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 VCPP55072 806 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ARL4CP56559 192 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 KDSRQ06136 332 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 RFTN1Q14699 578 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 TRIP10Q15642 601 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CALCRLQ16602 461 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 FAXCQ5TGI0 409 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SLC25A41Q8N5S1 370 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 HIPK4Q8NE63 616 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 EPS8L1Q8TE68 723 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 TBCKQ8TEA7 893 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 TANKQ92844 425 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 OLFM1Q99784 485 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ALG13Q9NP73 1137 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 KCND2Q9NZV8 630 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 DNMT3BQ9UBC3 853 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 IPO11Q9UI26 975 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CNTN6Q9UQ52 1028 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ITGAVP06756 1048 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CCDC130P13994 396 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CIITAP33076 1130 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 BCAP31P51572 246 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 FMO1Q01740 532 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 FOLH1Q04609 750 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 LRRC38Q5VT99 294 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CIAPIN1Q6FI81 312 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ARCQ7LC44 396 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GSTA5Q7RTV2 222 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GPR180Q86V85 440 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 PCYOX1LQ8NBM8 494 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 CATSPER1Q8NEC5 780 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 KBTBD7Q8WVZ9 684 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SHC3Q92529 594 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ISL2Q96A47 359 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 PHF12Q96QT6 1004 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 POP1Q99575 1024 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 ARPC5LQ9BPX5 153 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SLC13A1Q9BZW2 595 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GBA3Q9H227 469 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 MANSC1Q9H8J5 431 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 DNAJC28Q9NX36 388 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 NCKIPSDQ9NZQ3 722 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 GCNT4Q9P109 453 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 PPARGC1AQ9UBK2 798 aaKnown RBP8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SARDHQ9UL12 918 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 PSMD13Q9UNM6 376 aa8.74□□□□□ -1.01
CSMD1-213ENST00000523488 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-213ENST00000523488 FBP2O00757 339 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 STARD3NLO95772 234 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 NR3C1P04150 777 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 NCAM1P13591 858 aa8.73□□□□□ -1.01
CSMD1-213ENST00000523488 ZNF26P17031 533 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms