RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 FBLIM1Q8WUP2 373 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 PSPC1Q8WXF1 523 aaKnown RBP4.18□□□□□ -1.74
NPM1-210ENST00000523339 EDEM1Q92611 657 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 NXPE2Q96DL1 559 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 CCDC51Q96ER9 411 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 CPB2Q96IY4 423 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 CAMK1GQ96NX5 476 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 P2RY13Q9BPV8 354 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 SPZ1Q9BXG8 430 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 EIF2AQ9BY44 585 aaKnown RBP4.18□□□□□ -1.74
NPM1-210ENST00000523339 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 LSG1Q9H089 658 aaKnown RBP4.18□□□□□ -1.74
NPM1-210ENST00000523339 GLT8D2Q9H1C3 349 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 PRDM16Q9HAZ2 1276 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 POLR3BQ9NW08 1133 aaPredicted RBP4.18□□□□□ -1.74
NPM1-210ENST00000523339 SNTG2Q9NY99 539 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 CACNG4Q9UBN1 327 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 TPCN1Q9ULQ1 816 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 NUB1Q9Y5A7 615 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 INSL5Q9Y5Q6 135 aa4.18□□□□□ -1.74
NPM1-210ENST00000523339 SPTA1P02549 2419 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MYH6P13533 1939 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 LOXHD1Q8IVV2 1947 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 ZMYM2Q9UBW7 1377 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MYO9AB2RTY4 2548 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 C2orf16Q68DN1 1984 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 LOC100289279A0A1B0GTE1 492 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 FAM149AA5PLN7 773 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SMCO2A6NFE2 343 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 B8ZZF3 427 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 H7C4K7 107 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 EREGO14944 169 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SGSM2O43147 1006 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MARCH6O60337 910 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 NPTXRO95502 500 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 FGF19O95750 216 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 THP07101 528 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 BCKDHBP21953 392 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 ITPKAP23677 461 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 U2AF2P26368 475 aaKnown RBP eCLIP4.17□□□□□ -1.74
NPM1-210ENST00000523339 SMARCA1P28370 1054 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MARCKSP29966 332 aaPredicted RBP4.17□□□□□ -1.74
NPM1-210ENST00000523339 AXLP30530 894 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SFNP31947 248 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 HNF1BP35680 557 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 AVPR1AP37288 418 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 EIF2S3P41091 472 aaKnown RBP4.17□□□□□ -1.74
NPM1-210ENST00000523339 PTGER3P43115 390 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 ALDH1A3P47895 512 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MCM2P49736 904 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 CSRP3P50461 194 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 EPHB3P54753 998 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 FCHO2Q0JRZ9 810 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SLC14A1Q13336 389 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 AP3B2Q13367 1082 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 TFDP1Q14186 410 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 NFKBIBQ15653 356 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 INF2Q27J81 1249 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 PLEKHG6Q3KR16 790 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 GPR158Q5T848 1215 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 JAKMIP3Q5VZ66 844 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SLC23A3Q6PIS1 610 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 CYB5R4Q7L1T6 521 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SYT13Q7L8C5 426 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 NIPA1Q7RTP0 329 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 DEFB119Q8N690 84 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 LINC01465Q8N7H1 131 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SMG8Q8ND04 991 aaKnown RBP4.17□□□□□ -1.74
NPM1-210ENST00000523339 OR2I1PQ8NGU4 316 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 NCOA7Q8NI08 942 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 ZNF461Q8TAF7 563 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 TCP11Q8WWU5 503 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 PRPF31Q8WWY3 499 aaKnown RBP4.17□□□□□ -1.74
NPM1-210ENST00000523339 RLN3Q8WXF3 142 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 TMEM143Q96AN5 459 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 CEP170P1Q96L14 293 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 DRC1Q96MC2 740 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 PAAF1Q9BRP4 392 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 TEKT3Q9BXF9 490 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 TRIM4Q9C037 500 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 CSRNP2Q9H175 543 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 NXF3Q9H4D5 531 aaKnown RBP4.17□□□□□ -1.74
NPM1-210ENST00000523339 TRPV4Q9HBA0 871 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MIOSQ9NXC5 875 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 FAM13BQ9NYF5 915 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MTRRQ9UBK8 725 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 EBF1Q9UH73 591 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 TCHHQ07283 1943 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 MYH15Q9Y2K3 1946 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 SDK1Q7Z5N4 2213 aa4.17□□□□□ -1.74
NPM1-210ENST00000523339 ARHGEF37A1IGU5 675 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 TMEM150BA6NC51 233 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 METTL12A8MUP2 240 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 FAM86B1E9PN63 330 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 I3L4J1 428 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 HIP1O00291 1037 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 ARNTLO00327 626 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 ASAP2O43150 1006 aa4.16□□□□□ -1.74
NPM1-210ENST00000523339 DKC1O60832 514 aaKnown RBP eCLIP4.16□□□□□ -1.74
NPM1-210ENST00000523339 NDUFS2O75306 463 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms