RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, human

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC2-215	ENST00000523334	LCLAT1	Q6UWP7	414 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	POLN	Q7Z5Q5	900 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CPNE8	Q86YQ8	564 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	RASAL3	Q86YV0	1011 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	URGCP	Q8TCY9	931 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	FAM172A	Q8WUF8	416 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	C18orf25	Q96B23	403 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	DDX27	Q96GQ7	796 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TSPAN18	Q96SJ8	248 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PTPN18	Q99952	460 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	XYLT2	Q9H1B5	865 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SEMA4A	Q9H3S1	761 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PTPRH	Q9HD43	1115 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SEPT10	Q9P0V9	454 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SIX4	Q9UIU6	781 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	NEU2	Q9Y3R4	380 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334		A0A087WUV0	522 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TCRBV7S2A1N4T	A0A589	114 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334		H3BRJ5	948 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CDH16	O75309	829 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	AGT	P01019	485 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	INHBA	P08476	426 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PROZ	P22891	400 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	STIP1	P31948	543 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	RAB27A	P51159	221 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ZNF200	P98182	395 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SLC6A3	Q01959	620 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SP3	Q02447	781 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	NME3	Q13232	169 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	IRF5	Q13568	498 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PDK2	Q15119	407 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	DCAF12L1	Q5VU92	463 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	C9orf57	Q5W0N0	161 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SMYD5	Q6GMV2	418 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ZDHHC17	Q8IUH5	632 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SCN4B	Q8IWT1	228 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SCUBE3	Q8IX30	993 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ZBED8	Q8IZ13	594 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CACNA2D3	Q8IZS8	1091 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	C12orf29	Q8N999	325 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ATP11C	Q8NB49	1132 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	JOSD2	Q8TAC2	188 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SLC2A14	Q8TDB8	520 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	FNIP1	Q8TF40	1166 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	RNF139	Q8WU17	664 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	KCNN1	Q92952	543 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TBCB	Q99426	244 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TUBGCP4	Q9UGJ1	667 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	DNPEP	Q9ULA0	475 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ST3GAL5	Q9UNP4	418 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CNTN6	Q9UQ52	1028 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334		Q9Y3F1	56 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ATAD5	Q96QE3	1844 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SMAP	O00193	183 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	AP1G2	O75843	785 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SYF2	O95926	243 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	MSH2	P43246	934 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	MAGEA4	P43358	317 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	LHX1	P48742	406 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SULT1E1	P49888	294 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	IRAK1	P51617	712 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ZNF143	P52747	638 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	GUCY1A3	Q02108	690 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PTK6	Q13882	451 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	HEATR6	Q6AI08	1181 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PPP1R14C	Q8TAE6	165 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	RAPGEF5	Q92565	580 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SNX27	Q96L92	541 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SENP8	Q96LD8	212 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	HSFY1	Q96LI6	401 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SLITRK1	Q96PX8	696 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SMC6	Q96SB8	1091 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SYT15	Q9BQS2	421 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TMEM121	Q9BTD3	319 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TMBIM4	Q9HC24	238 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TTLL3	Q9Y4R7	772 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	IPP	Q9Y573	584 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	EVPL	Q92817	2033 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	KIAA1217	Q5T5P2	1943 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	KCNN4	O15554	427 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	SEPT4	O43236	478 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	TRAPPC3	O43617	180 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CREB3	O43889	395 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	CP	P00450	1065 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ODC1	P11926	461 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	PRKAR2A	P13861	404 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	KDELR1	P24390	212 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ACAT1	P24752	427 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	MDH1	P40925	334 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	ZNF132	P52740	706 aa		4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	HNRNPH2	P55795	449 aa	Known RBP	4.07	□□□□□ -1.76
HDAC2-215	ENST00000523334	DEUP1	Q05D60	604 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms