RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 IGKV2-30P06310 120 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 DLDP09622 509 aaKnown RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 XRCC6P12956 609 aaKnown RBP eCLIP4.85□□□□□ -1.63
CLK4-213ENST00000523013 FPR3P25089 353 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 ARHGAP25P42331 645 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 GTF2H3Q13889 308 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 TBC1D25Q3MII6 688 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 MGAT5BQ3V5L5 792 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 RNASE12Q5GAN4 147 aaKnown RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 L1TD1Q5T7N2 865 aaKnown RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 MTHFD1LQ6UB35 978 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 CAND1Q86VP6 1230 aaKnown RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 IZUMO1Q8IYV9 350 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 GALNT4Q8N4A0 578 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 STAG1Q8WVM7 1258 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 KBTBD7Q8WVZ9 684 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 ZC3H10Q96K80 434 aaKnown RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 RTFDC1Q9BY42 306 aaPredicted RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 SPRTNQ9H040 489 aaPredicted RBP4.85□□□□□ -1.63
CLK4-213ENST00000523013 TBC1D30Q9Y2I9 924 aa4.85□□□□□ -1.63
CLK4-213ENST00000523013 WDR17Q8IZU2 1322 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 PPEF2O14830 753 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 EXOC3O60645 756 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 PRKCBP05771 671 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 CT47B1P0C2W7 299 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 CYP2A6P11509 494 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 RENBPP51606 427 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 E2F1Q01094 437 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 SATB1Q01826 763 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 KRT17Q04695 432 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 CTBP1Q13363 440 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 TTF1Q15361 905 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 LMBRD2Q68DH5 695 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 DPY19L3Q6ZPD9 716 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 COL23A1Q86Y22 540 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 SLC35G2Q8TBE7 412 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 JPH3Q8WXH2 748 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 AIFM3Q96NN9 605 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 TAAR9Q96RI9 348 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 PRR25Q96S07 402 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 ACO2Q99798 780 aaKnown RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 CIPCQ9C0C6 399 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 ZMAT3Q9HA38 289 aaKnown RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 NMRK2Q9NPI5 230 aa4.84□□□□□ -1.63
CLK4-213ENST00000523013 TYW1Q9NV66 732 aaKnown RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.84□□□□□ -1.63
CLK4-213ENST00000523013 TCRBV5S1A1TA0A578 114 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 TMEM233B4DJY2 109 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 AP4M1O00189 453 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 BTN3A1O00481 513 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 KCNAB3O43448 404 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 BMP15O95972 392 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
CLK4-213ENST00000523013 KITP10721 976 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 PSG6Q00889 435 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 ZNF783Q6ZMS7 281 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 DAAM2Q86T65 1068 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 TPH2Q8IWU9 490 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 BPIFB1Q8TDL5 484 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 TMEM171Q8WVE6 324 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
CLK4-213ENST00000523013 VPS16Q9H269 839 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 SMURF2Q9HAU4 748 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 ATP6V0A4Q9HBG4 840 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 TRMT13Q9NUP7 481 aaKnown RBP4.83□□□□□ -1.64
CLK4-213ENST00000523013 ASIC5Q9NY37 505 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 TUBA8Q9NY65 449 aaPredicted RBP4.83□□□□□ -1.64
CLK4-213ENST00000523013 ELOVL5Q9NYP7 299 aa4.83□□□□□ -1.64
CLK4-213ENST00000523013 A0A1W2PPL8 197 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 E5RJQ4 531 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 AKAP10O43572 662 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 USP1O94782 785 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 HSPA6P17066 643 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 IBSPP21815 317 aaPredicted RBP4.82□□□□□ -1.64
CLK4-213ENST00000523013 MMP13P45452 471 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 RAB27AP51159 221 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 ALDH5A1P51649 535 aaPredicted RBP4.82□□□□□ -1.64
CLK4-213ENST00000523013 AGFG1P52594 562 aaKnown RBP4.82□□□□□ -1.64
CLK4-213ENST00000523013 PRKAG1P54619 331 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 PTCHD3Q3KNS1 767 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 BCDIN3DQ7Z5W3 292 aaKnown RBP4.82□□□□□ -1.64
CLK4-213ENST00000523013 CNGA4Q8IV77 575 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 OR6B3Q8NGW1 331 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 RAPGEF4Q8WZA2 1011 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 MAML1Q92585 1016 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 RSPRY1Q96DX4 576 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 LRGUKQ96M69 825 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 C17orf80Q9BSJ5 609 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 DPCDQ9BVM2 203 aaPredicted RBP4.82□□□□□ -1.64
CLK4-213ENST00000523013 GBA2Q9HCG7 927 aaPredicted RBP4.82□□□□□ -1.64
CLK4-213ENST00000523013 KLHL13Q9P2N7 655 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 ZNF180Q9UJW8 692 aa4.82□□□□□ -1.64
CLK4-213ENST00000523013 E2F8A0AVK6 867 aa4.81□□□□□ -1.64
CLK4-213ENST00000523013 MYCLP12524 364 aaPredicted RBP4.81□□□□□ -1.64
CLK4-213ENST00000523013 NR4A2P43354 598 aa4.81□□□□□ -1.64
CLK4-213ENST00000523013 SLC13A2Q13183 592 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms