RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TMEM110Q86TL2 294 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 XYLT1Q86Y38 959 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 HSFY1Q96LI6 401 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 MRPL47Q9HD33 250 aaKnown RBP22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 UVRAGQ9P2Y5 699 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 PCDHA11Q9Y5I1 949 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 LCP1P13796 627 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 TNNT1P13805 278 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 GRIK1P39086 918 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 ACADSBP45954 432 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 MAMLD1Q13495 774 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 ZNF268Q14587 947 aaPredicted RBP22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 TCEAL1Q15170 157 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 OR6B2Q6IFH4 312 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 PLEKHA7Q6IQ23 1121 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 SLC8B1Q6J4K2 584 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 CHRDL2Q6WN34 429 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 RNF19BQ6ZMZ0 732 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 ATAD1Q8NBU5 361 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 ZNF564Q8TBZ8 553 aaPredicted RBP22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 FUBP3Q96I24 572 aaKnown RBP eCLIP22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 CLSTN3Q9BQT9 956 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 PLVAPQ9BX97 442 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 CSNK1G1Q9HCP0 422 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 ALG13Q9NP73 1137 aaKnown RBP22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 DMAP1Q9NPF5 467 aaPredicted RBP22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 TMEM30AQ9NV96 361 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 WDR35Q9P2L0 1181 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 CAPN6Q9Y6Q1 641 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 SCINQ9Y6U3 715 aa22.53■■□□□ 1.2
R3HCC1-208ENST00000522012 GABBR2O75899 941 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 ETF1P62495 437 aaKnown RBP22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 SMARCB1Q12824 385 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 CFAP221Q4G0U5 840 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 SPRED2Q7Z698 418 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 SCN4BQ8IWT1 228 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 SCUBE3Q8IX30 993 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 SLC35F6Q8N357 371 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 ZMIZ2Q8NF64 920 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 TPCN2Q8NHX9 752 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 ALS2CR12Q96Q35 445 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 SELENOOQ9BVL4 669 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 ZBP1Q9H171 429 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 LRRC4Q9HBW1 653 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 CYLDQ9NQC7 956 aa22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 YBX2Q9Y2T7 364 aaKnown RBP22.52■■□□□ 1.2
R3HCC1-208ENST00000522012 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 MTMR11A4FU01 709 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 GJB6O95452 261 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 CTSAP10619 480 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 PBX2P40425 430 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 ROR1Q01973 937 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 SYT10Q6XYQ8 523 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 FAM183BPQ6ZVS7 135 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 TMC7Q7Z402 723 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 C3orf20Q8ND61 904 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 TRIM58Q8NG06 486 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 KCTD13Q8WZ19 329 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 UBXN6Q9BZV1 441 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 DNAI1Q9UI46 699 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 SSX2IPQ9Y2D8 614 aa22.52■■□□□ 1.19
R3HCC1-208ENST00000522012 F8VP50 259 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 KIF2AO00139 706 aaPredicted RBP22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 PALMO75781 387 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 CXCL14O95715 111 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 RPL34P49207 117 aaKnown RBP22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 DNTTIP2Q5QJE6 756 aaKnown RBP22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 SPPL2BQ8TCT7 592 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 ZNF592Q92610 1267 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 MCRS1Q96EZ8 462 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 TGS1Q96RS0 853 aaKnown RBP22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 WDR24Q96S15 920 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 ABCB6Q9NP58 842 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 LZTS1Q9Y250 596 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 SLC27A5Q9Y2P5 690 aa22.51■■□□□ 1.19
R3HCC1-208ENST00000522012 TCRBV5S1A1TA0A578 114 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 WDR27A2RRH5 827 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 GRID2IPA4D2P6 1211 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 TMEM110-MUSTN1A8MSY1 372 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 PAPSS1O43252 624 aaPredicted RBP22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 MTA2O94776 668 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 CSPG5O95196 566 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 TUBB4AP04350 444 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 KRT3P12035 628 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 MAGEA11P43364 429 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 HADHBP55084 474 aaKnown RBP22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 GSCP56915 257 aaPredicted RBP22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 ADIGQ0VDE8 80 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 FAM102AQ5T9C2 384 aaPredicted RBP22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 DCUN1D2Q6PH85 259 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 VSTM1Q6UX27 236 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 GPR65Q8IYL9 337 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 SIX6OS1Q8N1H7 587 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 FEZF2Q8TBJ5 459 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 C2orf15Q8WU43 125 aaKnown RBP22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 BTBD6Q96KE9 485 aa22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 CALR3Q96L12 384 aaKnown RBP22.5■■□□□ 1.19
R3HCC1-208ENST00000522012 C11orf84Q9BUA3 381 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms