RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LRRC15Q8TF66 581 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 SPACA7Q96KW9 195 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CYP2S1Q96SQ9 504 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 KLF16Q9BXK1 252 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CDT1Q9H211 546 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 PRDM16Q9HAZ2 1276 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 POLD4Q9HCU8 107 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 SH3GLB2Q9NR46 395 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 SLC38A7Q9NVC3 462 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 DUS2Q9NX74 493 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CNTN3Q9P232 1028 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 TUBGCP4Q9UGJ1 667 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 UTP20O75691 2785 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 IGHV1OR15-9A0A0B4J2B8 117 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 OR6C75A6NL08 312 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 B8ZZF3 427 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 PLK4O00444 970 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 AP5Z1O43299 807 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 MARCH6O60337 910 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 TADA3O75528 432 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 ALDH1A2O94788 518 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 KRT10P13645 584 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 MAOBP27338 520 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 MARCKSP29966 332 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 SLC6A11P48066 632 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 MRPS21P82921 87 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZXDBP98169 803 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 BFSP1Q12934 665 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZNF268Q14587 947 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 PLEKHG6Q3KR16 790 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 CC2D1AQ6P1N0 951 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 GPR155Q7Z3F1 870 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 LRRTM3Q86VH5 581 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 MON1AQ86VX9 555 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZBTB8OSQ8IWT0 167 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 BLIDQ8IZY5 108 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 TRIML1Q8N9V2 468 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 STKLD1Q8NE28 680 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 ITPKCQ96DU7 683 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZNF419Q96HQ0 510 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 SLC26A6Q9BXS9 759 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 RNF26Q9BY78 433 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 C22orf23Q9BZE7 217 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 HSFX1Q9UBD0 423 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 HCN2Q9UL51 889 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 BTBD3Q9Y2F9 522 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 FNDC3AQ9Y2H6 1198 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 NBASA2RRP1 2371 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 OBSL1O75147 1896 aa9.64□□□□□ -0.87
TRAPPC9-212ENST00000521944 A0A0A0MRY4 1105 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 TCRBV21S2A2A0A5A6 115 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 CAPN8A6NHC0 703 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 ESPNB1AK53 854 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 CPA1P15085 419 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 GABRG2P18507 467 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 HSPA4P34932 840 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 TLE3Q04726 772 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 MYBPC2Q14324 1141 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 SLC10A6Q3KNW5 377 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZC2HC1CQ53FD0 456 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 PPP1R26Q5T8A7 1209 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 RABEPKQ7Z6M1 372 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 GALNT15Q8N3T1 639 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 SETD7Q8WTS6 366 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 ATP2A3Q93084 1043 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 HSPA12BQ96MM6 686 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 AIFM3Q96NN9 605 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 ACAP3Q96P50 834 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 PNMA5Q96PV4 448 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 SEPT5Q99719 369 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 C2orf40Q9H1Z8 148 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 RWDD1Q9H446 243 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 KIF9Q9HAQ2 790 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 CD248Q9HCU0 757 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 CD93Q9NPY3 652 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 BCCIPQ9P287 314 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 NAP1L2Q9ULW6 460 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 TNFSF13BQ9Y275 285 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 CITO14578 2027 aa9.63□□□□□ -0.87
TRAPPC9-212ENST00000521944 ERVH48-1M5A8F1 160 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 PPEF2O14830 753 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 XRCC6P12956 609 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 IFNAR1P17181 557 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 PROZP22891 400 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 CLDN6P56747 220 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 FAM160A1Q05DH4 1040 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 USP4Q13107 963 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 BYSLQ13895 437 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 LY6DQ14210 128 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZBTB6Q15916 424 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 EARS2Q5JPH6 523 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 LMBRD2Q68DH5 695 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 TAS1R3Q7RTX0 852 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 C12orf40Q86WS4 652 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 CCDC26Q8TAB7 109 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 EXOC4Q96A65 974 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 ACO2Q99798 780 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms