RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C21orf58P58505 322 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 DSC2Q02487 901 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 ODF1Q14990 250 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 FLYWCH1Q4VC44 716 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 AKNAD1Q5T1N1 836 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 KRT27Q7Z3Y8 459 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 ZBTB46Q86UZ6 589 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 ADGRG5Q8IZF4 528 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 TMIEQ8NEW7 156 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 TOR1AIP2Q8NFQ8 470 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 VOPP1Q96AW1 172 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 CHMP4CQ96CF2 233 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 UROC1Q96N76 676 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 PLEKHF1Q96S99 279 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 LRFN3Q9BTN0 628 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 R3HDMLQ9H3Y0 253 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 FEZ2Q9UHY8 353 aaPredicted RBP4.01□□□□□ -1.77
VPS13B-209ENST00000521559 SERPINB13Q9UIV8 391 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 ZDHHC8Q9ULC8 765 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 SLC45A2Q9UMX9 530 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 PHRF1Q9P1Y6 1649 aaKnown RBP4.01□□□□□ -1.77
VPS13B-209ENST00000521559 DISP2A7MBM2 1401 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 NCAPD2Q15021 1401 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 CRYBG1Q9Y4K1 1723 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 KDRP35968 1356 aa4.01□□□□□ -1.77
VPS13B-209ENST00000521559 COL18A1P39060 1754 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 A0A0B4J269 797 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 NT5C1B-RDH14C9J2C7 533 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 F5H697 171 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 IL33O95760 270 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 HSP90AB1P08238 724 aaKnown RBP4□□□□□ -1.77
VPS13B-209ENST00000521559 RARBP10826 455 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 AKAP5P24588 427 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 PRDX5P30044 214 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 NPTX2P47972 431 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 HK3P52790 923 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 NHLH1Q02575 133 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 TUBB3Q13509 450 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 MTHFSDQ2M296 383 aaKnown RBP4□□□□□ -1.77
VPS13B-209ENST00000521559 FAM153CQ494X1 144 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 ZNF530Q6P9A1 599 aaPredicted RBP4□□□□□ -1.77
VPS13B-209ENST00000521559 USP45Q70EL2 814 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 FAM98AQ8NCA5 519 aaKnown RBP4□□□□□ -1.77
VPS13B-209ENST00000521559 SLC30A5Q8TAD4 765 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 POC1BQ8TC44 478 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 RGMAQ96B86 450 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 RUNDC1Q96C34 613 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 HSPBAP1Q96EW2 488 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 GPR35Q9HC97 309 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 ALG13Q9NP73 1137 aaKnown RBP4□□□□□ -1.77
VPS13B-209ENST00000521559 PEAK1Q9H792 1746 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 MARF1Q9Y4F3 1742 aaKnown RBP4□□□□□ -1.77
VPS13B-209ENST00000521559 PLEKHG2Q9H7P9 1386 aa4□□□□□ -1.77
VPS13B-209ENST00000521559 PCDH11XQ9BZA7 1347 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PCDH11YQ9BZA8 1340 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ABCA3Q99758 1704 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 OVOS2A0A0G2JMS6 1433 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ZNF785A8K8V0 405 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 GCOM1H8Y6P7 765 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 HTATSF1O43719 755 aaKnown RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ZRANB2O95218 330 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 POU2F2P09086 479 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PHKG2P15735 406 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 WT1P19544 449 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ITGALP20701 1170 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 TMPOP42166 694 aaKnown RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PSMC1P62191 440 aaKnown RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 EXOSC10Q01780 885 aaKnown RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 NOGQ13253 232 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 HABP2Q14520 560 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 KIF22Q14807 665 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PGS1Q32NB8 556 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 CCDC157Q569K6 752 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PLAC9Q5JTB6 97 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 C1orf141Q5JVX7 400 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ZNF362Q5T0B9 420 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 CCDC146Q8IYE0 955 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 FAM9BQ8IZU0 186 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PRR18Q8N4B5 295 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 CPA6Q8N4T0 437 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 NSUN7Q8NE18 718 aaKnown RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ZNF384Q8TF68 577 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 TFAP2BQ92481 460 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 LPIN2Q92539 896 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 OSBPL9Q96SU4 736 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 NELL2Q99435 816 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 NUP88Q99567 741 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 TIMP4Q99727 224 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ALG8Q9BVK2 526 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 SLAMF7Q9NQ25 335 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 KLC4Q9NSK0 619 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 LUC7L2Q9Y383 392 aaKnown RBP3.99□□□□□ -1.77
VPS13B-209ENST00000521559 PCDHA3Q9Y5H8 950 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 ENTPD2Q9Y5L3 495 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 NR2E3Q9Y5X4 410 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 MEGF6O75095 1541 aa3.99□□□□□ -1.77
VPS13B-209ENST00000521559 MAPK8IP3Q9UPT6 1336 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 GLI3P10071 1580 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 KIF20BQ96Q89 1820 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms