RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 KIAA2013Q8IYS2 634 aa27.62■■■□□ 2.01
LAPTM4B-203ENST00000521545 TMC2Q8TDI7 906 aa27.62■■■□□ 2.01
LAPTM4B-203ENST00000521545 EXOC4Q96A65 974 aa27.62■■■□□ 2.01
LAPTM4B-203ENST00000521545 EPC1Q9H2F5 836 aa27.62■■■□□ 2.01
LAPTM4B-203ENST00000521545 DUS2Q9NX74 493 aaKnown RBP27.62■■■□□ 2.01
LAPTM4B-203ENST00000521545 GCNT4Q9P109 453 aa27.62■■■□□ 2.01
LAPTM4B-203ENST00000521545 C2orf78A6NCI8 922 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 RHOBTB3O94955 611 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 ARSAP15289 507 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 PFKLP17858 780 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 CDH8P55286 799 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 NOP14P78316 857 aaKnown RBP27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 CCINQ13939 588 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 SGSM1Q2NKQ1 1148 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 WDR44Q5JSH3 913 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 KRBA2Q6ZNG9 492 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 Q6ZS52 159 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 CPA6Q8N4T0 437 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 CCDC34Q96HJ3 373 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 TNIP3Q96KP6 325 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 TTLL2Q9BWV7 592 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 SMYD3Q9H7B4 428 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 SMG5Q9UPR3 1016 aaKnown RBP27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 ATP8B3O60423 1300 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 ZNF292O60281 2723 aa27.61■■■□□ 2.01
LAPTM4B-203ENST00000521545 KIF26AQ9ULI4 1882 aaPredicted RBP27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 PRR29P0C7W0 189 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 IFNAR2P48551 515 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 USP46P62068 366 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 ZNF77Q15935 545 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 DCLK2Q8N568 766 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 RIN3Q8TB24 985 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 OSCP1Q8WVF1 389 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 B3GNT5Q9BYG0 378 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 ZNF518BQ9C0D4 1074 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 RAB23Q9ULC3 237 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 TRAF3IP3Q9Y228 551 aa27.6■■■□□ 2.01
LAPTM4B-203ENST00000521545 OTOL1A6NHN0 477 aaPredicted RBP27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 CLDN5O00501 218 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 TRDMT1O14717 391 aaKnown RBP27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 IKBKBO14920 756 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 VNN1O95497 513 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 ID4P47928 161 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 DLG4P78352 724 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 DPYDQ12882 1025 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 SCARA5Q6ZMJ2 495 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 SH3RF2Q8TEC5 729 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 ATP2A3Q93084 1043 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 MED10Q9BTT4 135 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 ARHGAP26Q9UNA1 814 aa27.59■■■□□ 2.01
LAPTM4B-203ENST00000521545 SPTBN4Q9H254 2564 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 ZNF202O95125 648 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 PAPSS2O95340 614 aaPredicted RBP27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 ABL1P00519 1130 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 RAP1GAPP47736 663 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 USP4Q13107 963 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 NR1H3Q13133 447 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 ZACNQ401N2 412 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 TMEM196Q5HYL7 178 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 TAF4BQ92750 862 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 SLITRK1Q96PX8 696 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 ECT2Q9H8V3 914 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 GREB1Q4ZG55 1949 aa27.58■■■□□ 2.01
LAPTM4B-203ENST00000521545 PTPRDP23468 1912 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 ZNF840PA6NDX5 716 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 MAPK13O15264 365 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 TAF10Q12962 218 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 SV2AQ7L0J3 742 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 GOLPH3LQ9H4A5 285 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 GDPD2Q9HCC8 539 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 MAPK8IP1Q9UQF2 711 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 WNT6Q9Y6F9 365 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 ANAPC1Q9H1A4 1944 aa27.57■■■□□ 2
LAPTM4B-203ENST00000521545 OTOGLQ3ZCN5 2332 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 CHURC1-FNTBB4DL54 471 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 RTN3O95197 1032 aaPredicted RBP27.56■■■□□ 2
LAPTM4B-203ENST00000521545 TCF3P15923 654 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 NR2F2P24468 414 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 RPL13P26373 211 aaKnown RBP27.56■■■□□ 2
LAPTM4B-203ENST00000521545 GJA4P35212 333 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 FNTBP49356 437 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 VAMP7P51809 220 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 CACNA2D1P54289 1103 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 IFRD2Q12894 506 aaPredicted RBP27.56■■■□□ 2
LAPTM4B-203ENST00000521545 BECN1Q14457 450 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 NFIL3Q16649 462 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 FSTL4Q6MZW2 842 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 NUP93Q8N1F7 819 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 GUF1Q8N442 669 aaKnown RBP27.56■■■□□ 2
LAPTM4B-203ENST00000521545 GPR161Q8N6U8 529 aaKnown RBP27.56■■■□□ 2
LAPTM4B-203ENST00000521545 ELMO3Q96BJ8 720 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 FRYLO94915 3013 aa27.56■■■□□ 2
LAPTM4B-203ENST00000521545 ATG13O75143 517 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 KRT13P13646 458 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 DRD1P21728 446 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 YWHAQP27348 245 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 PIK3CAP42336 1068 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 GALK1P51570 392 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 EML3Q32P44 896 aa27.55■■■□□ 2
LAPTM4B-203ENST00000521545 INTS8Q75QN2 995 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms