RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PPP3CAQ08209 521 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 ZNF658Q5TYW1 1059 aaPredicted RBP18.15■□□□□ 0.5
SQLE-205ENST00000521232 ELOA2Q8IYF1 753 aaPredicted RBP18.15■□□□□ 0.5
SQLE-205ENST00000521232 TNIP3Q96KP6 325 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 SLC22A12Q96S37 553 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 CYP2S1Q96SQ9 504 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 ZNF518BQ9C0D4 1074 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 CHRDQ9H2X0 955 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 SEMA4AQ9H3S1 761 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 TMEM30AQ9NV96 361 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 PCDHA5Q9Y5H7 936 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 TRAV19A0A0A6YYK7 116 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 CLDN5O00501 218 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 SMC2O95347 1197 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 USP17L7P0C7H9 530 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 PFKLP17858 780 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 GTF2H1P32780 548 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 CTHP32929 405 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 PPP3CCP48454 512 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 GCLMP48507 274 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 TNK2Q07912 1038 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 MTAPQ13126 283 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 ITPRIPL2Q3MIP1 535 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 SPOPLQ6IQ16 392 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 SCARA5Q6ZMJ2 495 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 PAQR9Q6ZVX9 377 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 UNC93AQ86WB7 457 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 CRYBG2Q8N1P7 616 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 TTC8Q8TAM2 541 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 RIN3Q8TB24 985 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 IER2Q9BTL4 223 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 GTPBP4Q9BZE4 634 aaKnown RBP18.14■□□□□ 0.49
SQLE-205ENST00000521232 TRPC7Q9HCX4 862 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 TRPM5Q9NZQ8 1165 aa18.14■□□□□ 0.49
SQLE-205ENST00000521232 ZNF292O60281 2723 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 C2orf78A6NCI8 922 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 CETN3O15182 167 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 CLSTN1O94985 981 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 TRIM49P0CI25 452 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 TRIM49CP0CI26 452 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 TCF3P15923 654 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 HDCP19113 662 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 PIK3CAP42336 1068 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 ASPAP45381 313 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 RUNX3Q13761 415 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 TXNDC11Q6PKC3 985 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 ARL14EPQ8N8R7 260 aaPredicted RBP18.13■□□□□ 0.49
SQLE-205ENST00000521232 TAS1R2Q8TE23 839 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 SMARCE1Q969G3 411 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 TMEM8AQ9HCN3 771 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 HPS4Q9NQG7 708 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 HOOK1Q9UJC3 728 aaKnown RBP18.13■□□□□ 0.49
SQLE-205ENST00000521232 R4GN57 208 aa18.13■□□□□ 0.49
SQLE-205ENST00000521232 EP300Q09472 2414 aaPredicted RBP18.13■□□□□ 0.49
SQLE-205ENST00000521232 ZNF840PA6NDX5 716 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 CKMP06732 381 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 PDE6CP51160 858 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 NDST1P52848 882 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 CSTF1Q05048 431 aaKnown RBP18.12■□□□□ 0.49
SQLE-205ENST00000521232 ZNF77Q15935 545 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 CC2D1AQ6P1N0 951 aaPredicted RBP18.12■□□□□ 0.49
SQLE-205ENST00000521232 ZC3H14Q6PJT7 736 aaKnown RBP18.12■□□□□ 0.49
SQLE-205ENST00000521232 ACOT1Q86TX2 421 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 NUP93Q8N1F7 819 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 NELL1Q92832 810 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 ERCC4Q92889 916 aaPredicted RBP18.12■□□□□ 0.49
SQLE-205ENST00000521232 KCNK16Q96T55 309 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 CYP3A43Q9HB55 503 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 APOBEC3GQ9HC16 384 aaKnown RBP18.12■□□□□ 0.49
SQLE-205ENST00000521232 PRMT8Q9NR22 394 aaPredicted RBP18.12■□□□□ 0.49
SQLE-205ENST00000521232 ARHGAP26Q9UNA1 814 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 ATP8B3O60423 1300 aa18.12■□□□□ 0.49
SQLE-205ENST00000521232 GVINP1Q7Z2Y8 2422 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 OTOL1A6NHN0 477 aaPredicted RBP18.11■□□□□ 0.49
SQLE-205ENST00000521232 TNFRSF10BO14763 440 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 RTN3O95197 1032 aaPredicted RBP18.11■□□□□ 0.49
SQLE-205ENST00000521232 INCA1Q0VD86 236 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 TAF10Q12962 218 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 LRRC32Q14392 662 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 MTF1Q14872 753 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 PDGFRLQ15198 375 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 WDR44Q5JSH3 913 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 DGKKQ5KSL6 1271 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 KRT39Q6A163 491 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 ANKRD40Q6AI12 368 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 TRIM68Q6AZZ1 485 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 FAM35AQ86V20 835 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 ZC3H3Q8IXZ2 948 aaKnown RBP18.11■□□□□ 0.49
SQLE-205ENST00000521232 ADSSL1Q8N142 457 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 EEF2KMTQ96G04 330 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 MED10Q9BTT4 135 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 IMPG2Q9BZV3 1241 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 EBF3Q9H4W6 596 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 IL37Q9NZH6 218 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 HMGXB4Q9UGU5 601 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 CIZ1Q9ULV3 898 aaPredicted RBP18.11■□□□□ 0.49
SQLE-205ENST00000521232 MYH10P35580 1976 aa18.11■□□□□ 0.49
SQLE-205ENST00000521232 EPB41P11171 864 aaKnown RBP18.1■□□□□ 0.49
SQLE-205ENST00000521232 YWHAQP27348 245 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms