RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
SNHG6-201ENST00000520348 SEL1L2Q5TEA6 688 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 OVOS1Q6IE37 1185 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 WDR93Q6P2C0 686 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 LRRC43Q8N309 656 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 ARFGAP1Q8N6T3 406 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 EXD1Q8NHP7 514 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 CNPY3Q9BT09 278 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 C11orf84Q9BUA3 381 aaPredicted RBP16.88■□□□□ 0.29
SNHG6-201ENST00000520348 ASNSD1Q9NWL6 643 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 LRFN2Q9ULH4 789 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNHG6-201ENST00000520348 DNAH12Q6ZR08 3092 aa16.88■□□□□ 0.29
SNHG6-201ENST00000520348 ABHD14A-ACY1A0A1B0GW23 586 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 BHMG1C9JSJ3 638 aaPredicted RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 F8VP50 259 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 NRP1O14786 923 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 LRCH4O75427 683 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 FGGP02679 453 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 PSMA2P25787 234 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 PTPN7P35236 360 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 PCK1P35558 622 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 OR1G1P47890 313 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 SLC11A1P49279 550 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 RNASELQ05823 741 aaKnown RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 ADCY1Q08828 1119 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 ZNF211Q13398 564 aaPredicted RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 IKBKEQ14164 716 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 MRPL58Q14197 206 aaKnown RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 MAPRE1Q15691 268 aaKnown RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 PPP2R5EQ16537 467 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 RAB41Q5JT25 222 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 OR6B2Q6IFH4 312 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 CC2D1AQ6P1N0 951 aaPredicted RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 THEM5Q8N1Q8 247 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 ZMIZ2Q8NF64 920 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 HASPINQ8TF76 798 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 MYLPFQ96A32 169 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 FAM193BQ96PV7 902 aaPredicted RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 SMOQ99835 787 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 PLVAPQ9BX97 442 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 RC3H2Q9HBD1 1191 aaKnown RBP16.87■□□□□ 0.29
SNHG6-201ENST00000520348 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 BRCA2P51587 3418 aa16.87■□□□□ 0.29
SNHG6-201ENST00000520348 VWA8A3KMH1 1905 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 TRIM43BA6NCK2 446 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 HHLA1C9JL84 531 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 CLDN5O00501 218 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 FSCN2O14926 492 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 EFCAB14O75071 495 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 BEST1O76090 585 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 GPD1P21695 349 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 ITGB8P26012 769 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 FLT3P36888 993 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 PTPN9P43378 593 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SLC8A3P57103 927 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 YWHAHQ04917 246 aaPredicted RBP16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SIX1Q15475 284 aaPredicted RBP16.86■□□□□ 0.29
SNHG6-201ENST00000520348 CYP1B1Q16678 543 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.86■□□□□ 0.294e-7■■□□□ 12.9
SNHG6-201ENST00000520348 DEFB128Q7Z7B8 93 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SLC13A5Q86YT5 568 aaPredicted RBP16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SCML4Q8N228 414 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 EMC1Q8N766 993 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 TRIM43Q96BQ3 446 aaPredicted RBP16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SMARCD1Q96GM5 515 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 PNKPQ96T60 521 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 COLEC11Q9BWP8 271 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 EPC1Q9H2F5 836 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SLITRK6Q9H5Y7 841 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 TMEM30AQ9NV96 361 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNHG6-201ENST00000520348 ADAM28Q9UKQ2 775 aa16.86■□□□□ 0.29
SNHG6-201ENST00000520348 DGKIO75912 1065 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 FBXO21O94952 628 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 GALTP07902 379 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 GLI1P08151 1106 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 TCF4P15884 667 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 FGFR3P22607 806 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 TAZQ16635 292 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 DAB2IPQ5VWQ8 1189 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 MFSD5Q6N075 450 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 AADACL2Q6P093 401 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
SNHG6-201ENST00000520348 ZDHHC14Q8IZN3 488 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 C12orf50Q8NA57 414 aaPredicted RBP16.85■□□□□ 0.29
SNHG6-201ENST00000520348 RXFP2Q8WXD0 754 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 NCAPGQ9BPX3 1015 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 TMEM106CQ9BVX2 250 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 PARD6BQ9BYG5 372 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 ZCWPW1Q9H0M4 648 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 TMLHEQ9NVH6 421 aa16.85■□□□□ 0.29
SNHG6-201ENST00000520348 DDX56Q9NY93 547 aaKnown RBP16.85■□□□□ 0.29
SNHG6-201ENST00000520348 PRG3Q9Y2Y8 225 aaPredicted RBP16.85■□□□□ 0.29
SNHG6-201ENST00000520348 CCDC151A5D8V7 595 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 TBKBP1A7MCY6 615 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms