RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 LMAN1LQ9HAT1 526 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 PRMT8Q9NR22 394 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 OLFML3Q9NRN5 406 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 ZSCAN32Q9NX65 697 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 NDRG2Q9UN36 371 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 PCDHGA2Q9Y5H1 932 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 PIAS3Q9Y6X2 628 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 CACNA1IQ9P0X4 2223 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 OTOGLQ3ZCN5 2332 aa9.99□□□□□ -0.81
CTNNA1-221ENST00000520339 KPNA7A9QM74 516 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 CHADO15335 359 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 KINO60870 393 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 LILRB5O75023 590 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 GCNT3O95395 438 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 FGF19O95750 216 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 CHRNB1P11230 501 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 IDEP14735 1019 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 ATF6P18850 670 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 GARTP22102 1010 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 GABRR2P28476 465 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 STAT6P42226 847 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 NASPP49321 788 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 CDR1P51861 262 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 TFAMQ00059 246 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 MTAPQ13126 283 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 ALCAMQ13740 583 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 MGAT5BQ3V5L5 792 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 SLC39A12Q504Y0 691 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 GPR158Q5T848 1215 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 SCARA3Q6AZY7 606 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 BTLAQ7Z6A9 289 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 ITIH5Q86UX2 942 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 C1orf127Q8N9H9 656 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 LINC00301Q8NCQ3 95 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 CXorf38Q8TB03 319 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 C2orf15Q8WU43 125 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 RUBCNQ92622 972 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 ALKBH8Q96BT7 664 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 SAAL1Q96ER3 474 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 SEPT5Q99719 369 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 CBWD1Q9BRT8 395 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 IER2Q9BTL4 223 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 SLITRK6Q9H5Y7 841 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 TASP1Q9H6P5 420 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 PANK4Q9NVE7 773 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 TMLHEQ9NVH6 421 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 OBP2AQ9NY56 170 aa9.98□□□□□ -0.81
CTNNA1-221ENST00000520339 GOLGA8IPA6NC78 632 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 A6NHS1 94 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 STX6O43752 255 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 EXTL3O43909 919 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 PRPF6O94906 941 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 LDHAP00338 332 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 RPLP1P05386 114 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 TDGF1P13385 188 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 HMGA1P17096 107 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 CCNE1P24864 410 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 CDC25CP30307 473 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 POLR2BP30876 1174 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 PNPLA4P41247 253 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 ID4P47928 161 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 GAS6Q14393 721 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 SV2CQ496J9 727 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 YAF2Q8IY57 180 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 DCP1BQ8IZD4 617 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 SYCP3Q8IZU3 236 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 PDCL2Q8N4E4 241 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 DCLK2Q8N568 766 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 SPPL2BQ8TCT7 592 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 ATRIPQ8WXE1 791 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 MSANTD3Q96H12 275 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 FAM84AQ96KN4 292 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 SLC46A2Q9BY10 475 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 RUBCNLQ9H714 662 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 C8orf33Q9H7E9 229 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 TMEM206Q9H813 350 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 RBAKQ9NYW8 714 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 AGAP1Q9UPQ3 857 aa9.97□□□□□ -0.81
CTNNA1-221ENST00000520339 COL4A3Q01955 1670 aa9.96□□□□□ -0.81
CTNNA1-221ENST00000520339 MYBPHLA2RUH7 354 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 PRAMEF12O95522 483 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 F11P03951 625 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 HOXD13P35453 343 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 SOX9P48436 509 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 ARSDP51689 593 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 KPNA1P52294 538 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 RBP5P82980 135 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 CYP4F8P98187 520 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 VEPH1Q14D04 833 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 STK38Q15208 465 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 C1orf228Q6PIY5 440 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 TXNDC11Q6PKC3 985 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms