RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 GBP2P32456 591 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 IRS1P35568 1242 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 AVPR1AP37288 418 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 GRIK1P39086 918 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 CASP4P49662 377 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 AFF1P51825 1210 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 BCAT1P54687 386 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PFKPQ01813 784 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PTK2Q05397 1052 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 INCA1Q0VD86 236 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 CUL2Q13617 745 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 TRIM14Q14142 442 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SMAD2Q15796 467 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 LONRF2Q1L5Z9 754 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SGO2Q562F6 1265 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 LMBRD2Q68DH5 695 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PRSS55Q6UWB4 352 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SCARA5Q6ZMJ2 495 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 LEKR1Q6ZMV7 388 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 HDXQ7Z353 690 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 CACNA2D4Q7Z3S7 1137 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 TMEM173Q86WV6 379 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 GLYCTKQ8IVS8 523 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ADHFE1Q8IWW8 467 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SUGP1Q8IWZ8 645 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 YAF2Q8IY57 180 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 C3orf58Q8NDZ4 430 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 OR5B17Q8NGF7 314 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SLC22A17Q8WUG5 538 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 BCL7CQ8WUZ0 217 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ERCC4Q92889 916 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 MSANTD3Q96H12 275 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SPATA17Q96L03 361 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 HEXIM2Q96MH2 286 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 CLSTN3Q9BQT9 956 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PAAF1Q9BRP4 392 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 NUP58Q9BVL2 599 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PARD6BQ9BYG5 372 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 INTS2Q9H0H0 1204 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 HSD3B7Q9H2F3 369 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SYNCQ9H7C4 482 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 KIF9Q9HAQ2 790 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 AVENQ9NQS1 362 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ZNHIT6Q9NWK9 470 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 TRPM5Q9NZQ8 1165 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 IGSF9Q9P2J2 1179 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 APEX2Q9UBZ4 518 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 L1RE1Q9UN81 338 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PPP2R2CQ9Y2T4 447 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 MRPS23Q9Y3D9 190 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 USP15Q9Y4E8 981 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 YIPF1Q9Y548 306 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 WDR27A2RRH5 827 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 MTMR11A4FU01 709 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 GRXCR2A6NFK2 248 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 H3BQ06 376 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 H3BQF6 201 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 I3L4J1 428 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TBC1D4O60343 1298 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 LILRB3O75022 631 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 EFEMP2O95967 443 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 RALAP11233 206 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 VDRP11473 427 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 CD19P15391 556 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 EPCAMP16422 314 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 PTPN1P18031 435 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 CD58P19256 250 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 KRT9P35527 623 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 ACADSBP45954 432 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 GUCY2FP51841 1108 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 UBASH3AP57075 661 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 CORO7P57737 925 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 MCCD1P59942 119 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 UBXN1Q04323 297 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TWF1Q12792 350 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 MTMR3Q13615 1198 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 SOWAHAQ2M3V2 549 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TTC31Q49AM3 519 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 MDH1BQ5I0G3 518 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 BEND6Q5SZJ8 279 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TMC5Q6UXY8 1006 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 DENND5BQ6ZUT9 1274 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 NUDT18Q6ZVK8 323 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 ADGRD2Q7Z7M1 963 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 ZNF677Q86XU0 584 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 SCN4BQ8IWT1 228 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 UBALD2Q8IYN6 164 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 ZDHHC14Q8IZN3 488 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 SIX6OS1Q8N1H7 587 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 CEP112Q8N8E3 955 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 KIAA1958Q8N8K9 716 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 EHBP1Q8NDI1 1231 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 FAM71BQ8TC56 605 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TAS1R2Q8TE23 839 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 DEPDC1BQ8WUY9 529 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 AUTS2Q8WXX7 1259 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 PSMG2Q969U7 264 aa5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TRMT2BQ96GJ1 504 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-220ENST00000520260 TMEM176AQ96HP8 235 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms