RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GCP02774 474 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 MYL3P08590 195 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 TSHRP16473 764 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 BTF3P20290 206 aaKnown RBP3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 ACVR2AP27037 513 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 MPLP40238 635 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 PDE6CP51160 858 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 HNRNPMP52272 730 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 PRKAG1P54619 331 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 MRPS35P82673 323 aaKnown RBP3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 BTKQ06187 659 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 NPY5RQ15761 445 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZNF618Q5T7W0 954 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 HECTD2Q5U5R9 776 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 CATSPERGQ6ZRH7 1159 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZNF280BQ86YH2 543 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 FAM186BQ8IYM0 893 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SPARTQ8N0X7 666 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SLC44A3Q8N4M1 653 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 CCDC33Q8N5R6 958 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SAMD3Q8N6K7 520 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 BEND2Q8NDZ0 799 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 MYCBPAPQ8TBZ2 947 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 ATRIPQ8WXE1 791 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 GJA10Q969M2 543 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 PPP2R3CQ969Q6 453 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 FKBP10Q96AY3 582 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 EIF2AQ9BY44 585 aaKnown RBP3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 CXorf36Q9H7Y0 433 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 NLRC4Q9NPP4 1024 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 LRIT1Q9P2V4 623 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SERTAD3Q9UJW9 196 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 CAPN11Q9UMQ6 739 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SH2B3Q9UQQ2 575 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SSX2IPQ9Y2D8 614 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 CDY1Q9Y6F8 540 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 ADGRA2Q96PE1 1338 aa3.96□□□□□ -1.77
HMGB1P41-201ENST00000520234 A0A1W2PPC4 97 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 WDR27A2RRH5 827 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 PROB1E7EW31 1015 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 hCG_1984214I3L0E3 225 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 RAB27BO00194 218 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 APOL1O14791 398 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 RAMP2O60895 175 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 NXPH3O95157 252 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 A1BGP04217 495 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 TPH1P17752 444 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 KRT4P19013 534 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 TNFSF4P23510 183 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 PRKAR1BP31321 381 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 HTR3AP46098 478 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 PTDSS1P48651 473 aaKnown RBP3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 CPT1AP50416 773 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 CCNIQ14094 377 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 BRD3Q15059 726 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 TBCCQ15814 346 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ERCC6LQ2NKX8 1250 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZIK1Q3SY52 487 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 PLAC9Q5JTB6 97 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 CERCAMQ5T4B2 595 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 SYCP2LQ5T4T6 812 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 IZUMO3Q5VZ72 239 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZKSCAN2Q63HK3 967 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 KAZNQ674X7 775 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 MZT2AQ6P582 158 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZDHHC24Q6UX98 284 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 TSHZ1Q6ZSZ6 1077 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 KRT28Q7Z3Y7 464 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 OR2C3Q8N628 320 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 RNF152Q8N8N0 203 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ACRBPQ8NEB7 543 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 PARD3BQ8TEW8 1205 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 OSCP1Q8WVF1 389 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF668Q96K58 619 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 PBKQ96KB5 322 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 RIPOR3Q96MK2 946 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 TRIM5Q9C035 493 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZCWPW1Q9H0M4 648 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 CHST12Q9NRB3 414 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 EHD3Q9NZN3 535 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 DNMT3BQ9UBC3 853 aaKnown RBP3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 MYO1AQ9UBC5 1043 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 DKK4Q9UBT3 224 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 MID2Q9UJV3 735 aa3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 MRPS17Q9Y2R5 130 aaKnown RBP3.96□□□□□ -1.78
HMGB1P41-201ENST00000520234 H7C4K7 107 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 PPM1DO15297 605 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 RRP9O43818 475 aaKnown RBP3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 FGF18O76093 207 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 RASAL1O95294 804 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 CSF1RP07333 972 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 FGFR2P21802 821 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 BCAT1P54687 386 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 FOXI1Q12951 378 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 BMPR2Q13873 1038 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 TXNRD1Q16881 649 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF750Q32MQ0 723 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 FAM209BQ5JX69 171 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 DGKKQ5KSL6 1271 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 PLAG1Q6DJT9 500 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms