RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 OR6B3Q8NGW1 331 aa16.62■□□□□ 0.25
CLK4-205ENST00000520199 LINC00597Q9H2U6 94 aa16.62■□□□□ 0.25
CLK4-205ENST00000520199 ZSCAN32Q9NX65 697 aa16.62■□□□□ 0.25
CLK4-205ENST00000520199 SPTBN2O15020 2390 aa16.62■□□□□ 0.25
CLK4-205ENST00000520199 DPYSL4O14531 572 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 NCAM2O15394 837 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 AKAP3O75969 853 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 ZNF202O95125 648 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 ATICP31939 592 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 PPP3CAQ08209 521 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 RUNX3Q13761 415 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 NCOA4Q13772 614 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 TAF12Q16514 161 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 TMEM196Q5HYL7 178 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 B3GALNT2Q8NCR0 500 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 ZMIZ2Q8NF64 920 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 TMC2Q8TDI7 906 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 MRPS31Q92665 395 aaKnown RBP16.61■□□□□ 0.25
CLK4-205ENST00000520199 C8orf48Q96LL4 319 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 KCNK16Q96T55 309 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 APOBEC3GQ9HC16 384 aaKnown RBP16.61■□□□□ 0.25
CLK4-205ENST00000520199 PCDHGA2Q9Y5H1 932 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 ABCA7Q8IZY2 2146 aa16.61■□□□□ 0.25
CLK4-205ENST00000520199 ZNF840PA6NDX5 716 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 TNFRSF10BO14763 440 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 BEST1O76090 585 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 OLFM2O95897 454 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 MYL1P05976 194 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
CLK4-205ENST00000520199 AVPR1AP37288 418 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 GRIK1P39086 918 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
CLK4-205ENST00000520199 PLCB2Q00722 1185 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 SRSF5Q13243 272 aaKnown RBP16.6■□□□□ 0.25
CLK4-205ENST00000520199 ORC1Q13415 861 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 EML3Q32P44 896 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
CLK4-205ENST00000520199 FUKQ8N0W3 1084 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 FMR1NBQ8N0W7 255 aaPredicted RBP16.6■□□□□ 0.25
CLK4-205ENST00000520199 ENGASEQ8NFI3 743 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 GCNAQ96QF7 691 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 TWNKQ96RR1 684 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 EPC1Q9H2F5 836 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 SNX25Q9H3E2 840 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 IL37Q9NZH6 218 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 UXTQ9UBK9 157 aaPredicted RBP16.6■□□□□ 0.25
CLK4-205ENST00000520199 WNT6Q9Y6F9 365 aa16.6■□□□□ 0.25
CLK4-205ENST00000520199 TRDMT1O14717 391 aaKnown RBP16.59■□□□□ 0.25
CLK4-205ENST00000520199 HRO43593 1189 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 PAPSS2O95340 614 aaPredicted RBP16.59■□□□□ 0.25
CLK4-205ENST00000520199 ASS1P00966 412 aaKnown RBP16.59■□□□□ 0.25
CLK4-205ENST00000520199 TCF3P15923 654 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 ASPAP45381 313 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 TNNC1P63316 161 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 MESP2Q0VG99 397 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 MTF1Q14872 753 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 NFIL3Q16649 462 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 DENND5BQ6ZUT9 1274 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 SPEM1Q8N4L4 309 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 SCAMP5Q8TAC9 235 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 SH3RF2Q8TEC5 729 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 WBP2Q969T9 261 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
CLK4-205ENST00000520199 EEF2KMTQ96G04 330 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 MSANTD3Q96H12 275 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 TRPC7Q9HCX4 862 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLK4-205ENST00000520199 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
CLK4-205ENST00000520199 A8MXQ7 604 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
CLK4-205ENST00000520199 OAS1P00973 400 aaKnown RBP16.58■□□□□ 0.24
CLK4-205ENST00000520199 EGFP01133 1207 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 HLA-DRAP01903 254 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 TRIM49P0CI25 452 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 TRIM49CP0CI26 452 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 HDCP19113 662 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 GJA4P35212 333 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 CXCL12P48061 93 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 GALK1P51570 392 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 TAF10Q12962 218 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 BIRC3Q13489 604 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 TRPC3Q13507 836 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 PNOCQ13519 176 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 KCNB1Q14721 858 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 MAPRE1Q15691 268 aaKnown RBP16.58■□□□□ 0.24
CLK4-205ENST00000520199 ZNF699Q32M78 642 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 ACOT1Q86TX2 421 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 SFTPA1Q8IWL2 248 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 GUF1Q8N442 669 aaKnown RBP16.58■□□□□ 0.24
CLK4-205ENST00000520199 C12orf29Q8N999 325 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
CLK4-205ENST00000520199 ZFRQ96KR1 1074 aaKnown RBP16.58■□□□□ 0.24
CLK4-205ENST00000520199 SMOQ99835 787 aa16.58■□□□□ 0.24
CLK4-205ENST00000520199 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms