RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ZWILCHQ9H900 591 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 GRK4P32298 578 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 ACADSBP45954 432 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 CLCNKBP51801 687 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 AFF1P51825 1210 aaKnown RBP28.32■■■□□ 2.12
COL13A1-212ENST00000520133 GABPB1Q06547 395 aaPredicted RBP28.32■■■□□ 2.12
COL13A1-212ENST00000520133 KAZNQ674X7 775 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 OSTM1Q86WC4 334 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 SLC2A14Q8TDB8 520 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 RAPGEF5Q92565 580 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 FAM129AQ9BZQ8 928 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 STARD7Q9NQZ5 370 aa28.32■■■□□ 2.12
COL13A1-212ENST00000520133 GABRDO14764 452 aa28.31■■■□□ 2.12
COL13A1-212ENST00000520133 SLC8A3P57103 927 aa28.31■■■□□ 2.12
COL13A1-212ENST00000520133 WSCD1Q658N2 575 aa28.31■■■□□ 2.12
COL13A1-212ENST00000520133 ANKS1BQ7Z6G8 1248 aa28.31■■■□□ 2.12
COL13A1-212ENST00000520133 HSFY1Q96LI6 401 aa28.31■■■□□ 2.12
COL13A1-212ENST00000520133 EFR3BQ9Y2G0 817 aa28.31■■■□□ 2.12
COL13A1-212ENST00000520133 R3HDM2Q9Y2K5 976 aaKnown RBP28.31■■■□□ 2.12
COL13A1-212ENST00000520133 hCG_1818297A0A087WSY0 165 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 A0A1W2PQ45 241 aaPredicted RBP28.3■■■□□ 2.12
COL13A1-212ENST00000520133 A0A1W2PQY0 241 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 AGPSO00116 658 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 OPA1O60313 960 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 SYF2O95926 243 aaKnown RBP28.3■■■□□ 2.12
COL13A1-212ENST00000520133 CKBP12277 381 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 KRT10P13645 584 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 MIPP30301 263 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 CDKN2BP42772 138 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 LHX1P48742 406 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 KRT17Q04695 432 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 MTMR3Q13615 1198 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 KCTD19Q17RG1 926 aaPredicted RBP28.3■■■□□ 2.12
COL13A1-212ENST00000520133 DSTYKQ6XUX3 929 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 GOLGA6L1Q8N7Z2 621 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 ZNF296Q8WUU4 475 aaPredicted RBP28.3■■■□□ 2.12
COL13A1-212ENST00000520133 CCDC114Q96M63 670 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 HNRNPABQ99729 332 aaKnown RBP28.3■■■□□ 2.12
COL13A1-212ENST00000520133 ZDHHC18Q9NUE0 388 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 USP18Q9UMW8 372 aa28.3■■■□□ 2.12
COL13A1-212ENST00000520133 PAPSS1O43252 624 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 IL1R2P27930 398 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 RPL21P46778 160 aaKnown RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 RPL34P49207 117 aaKnown RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 PLTPP55058 493 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 LMNB2Q03252 620 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 SCUBE3Q8IX30 993 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 IQCKQ8N0W5 287 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 ZBTB9Q96C00 473 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 PIWIL1Q96J94 861 aaKnown RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 NCAPGQ9BPX3 1015 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 DPYSL4O14531 572 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 PTPN1P18031 435 aaKnown RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 FLT3P36888 993 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 SCNN1AP37088 669 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 SMTNL2Q2TAL5 461 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 SLC43A3Q8NBI5 491 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 ACSF2Q96CM8 615 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 TRPV6Q9H1D0 765 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 GRHL1Q9NZI5 618 aa28.29■■■□□ 2.12
COL13A1-212ENST00000520133 MTRF1LQ9UGC7 380 aaKnown RBP28.29■■■□□ 2.12
COL13A1-212ENST00000520133 GRAP2O75791 330 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 TRUB2O95900 331 aaKnown RBP28.28■■■□□ 2.12
COL13A1-212ENST00000520133 GRIK3Q13003 919 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 PTK6Q13882 451 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 UPP1Q16831 310 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 ZIM3Q96PE6 472 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 DDX43Q9NXZ2 648 aaKnown RBP28.28■■■□□ 2.12
COL13A1-212ENST00000520133 CACNG4Q9UBN1 327 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 PCSK1NQ9UHG2 260 aa28.28■■■□□ 2.12
COL13A1-212ENST00000520133 CASTOR2A6NHX0 329 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 XPO1O14980 1071 aaKnown RBP28.27■■■□□ 2.12
COL13A1-212ENST00000520133 KDELR1P24390 212 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 SDC4P31431 198 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 CALCOCO2Q13137 446 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 KCNT1Q5JUK3 1230 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 DRICH1Q6PGQ1 229 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-212ENST00000520133 HTTP42858 3142 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 IBSPP21815 317 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-212ENST00000520133 PAX3P23760 479 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 TRNP1Q6NT89 227 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 TMC3Q7Z5M5 1100 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 ECHDC2Q86YB7 292 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 KCTD6Q8NC69 237 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 FBXO25Q8TCJ0 367 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 DUSP16Q9BY84 665 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 ASIC3Q9UHC3 531 aa28.27■■■□□ 2.12
COL13A1-212ENST00000520133 C3orf70A6NLC5 250 aaPredicted RBP28.26■■■□□ 2.11
COL13A1-212ENST00000520133 KBTBD13C9JR72 458 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 POMCP01189 267 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 ACAT1P24752 427 aaKnown RBP28.26■■■□□ 2.11
COL13A1-212ENST00000520133 DHX9Q08211 1270 aaKnown RBP28.26■■■□□ 2.11
COL13A1-212ENST00000520133 CCDC14Q49A88 953 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 ZDHHC24Q6UX98 284 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 SLC26A9Q7LBE3 791 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 ARCQ7LC44 396 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 FUKQ8N0W3 1084 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 CMASQ8NFW8 434 aaPredicted RBP28.26■■■□□ 2.11
COL13A1-212ENST00000520133 B3GNT5Q9BYG0 378 aa28.26■■■□□ 2.11
COL13A1-212ENST00000520133 SAGE1Q9NXZ1 904 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms