RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CACHD1Q5VU97 1274 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 HIBCHQ6NVY1 386 aaPredicted RBP7.4□□□□□ -1.22
PTPN12-213ENST00000519553 SRLQ86TD4 932 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 PEG10Q86TG7 708 aaKnown RBP7.4□□□□□ -1.22
PTPN12-213ENST00000519553 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 PPP2R3CQ969Q6 453 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 PDLIM2Q96JY6 352 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 SGCZQ96LD1 299 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 ELAC2Q9BQ52 826 aaKnown RBP7.4□□□□□ -1.22
PTPN12-213ENST00000519553 GBA2Q9HCG7 927 aaPredicted RBP7.4□□□□□ -1.22
PTPN12-213ENST00000519553 GJB4Q9NTQ9 266 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 DKK4Q9UBT3 224 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 CAPN11Q9UMQ6 739 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 SNX14Q9Y5W7 946 aa7.4□□□□□ -1.22
PTPN12-213ENST00000519553 A0A087X1B8 175 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 APOL1O14791 398 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 MGST3O14880 152 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 RAMP2O60895 175 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 SRGAP2O75044 1071 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 CLCN2P51788 898 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 ZNF169Q14929 603 aaPredicted RBP7.39□□□□□ -1.23
PTPN12-213ENST00000519553 TBCCQ15814 346 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 ZNF750Q32MQ0 723 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 DEPDC1Q5TB30 811 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 KAZNQ674X7 775 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 RNF44Q7L0R7 432 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 ABRAQ8N0Z2 381 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 SDR16C5Q8N3Y7 309 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 VGLL2Q8N8G2 317 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 DNAJB14Q8TBM8 379 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 IPCEF1Q8WWN9 437 aaPredicted RBP7.39□□□□□ -1.23
PTPN12-213ENST00000519553 CCDC138Q96M89 665 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 MYD88Q99836 296 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 TRIM5Q9C035 493 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 EHD3Q9NZN3 535 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 LRIT1Q9P2V4 623 aa7.39□□□□□ -1.23
PTPN12-213ENST00000519553 ZAR1LA6NP61 321 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 THAP12O43422 761 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 TLR5O60602 858 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 IL6RP08887 468 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-213ENST00000519553 IFIT2P09913 472 aaKnown RBP7.38□□□□□ -1.23
PTPN12-213ENST00000519553 ELFN1P0C7U0 828 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 SERPINB3P29508 390 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 LIPAP38571 399 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 SIM1P81133 766 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-213ENST00000519553 HDAC1Q13547 482 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-213ENST00000519553 CERCAMQ5T4B2 595 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 PLAG1Q6DJT9 500 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 XRRA1Q6P2D8 792 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 OSCP1Q8WVF1 389 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 SLC9A6Q92581 669 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 GLG1Q92896 1179 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 TNIP3Q96KP6 325 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 IKZF4Q9H2S9 585 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 TBC1D23Q9NUY8 699 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
PTPN12-213ENST00000519553 SLC16A3O15427 465 aaKnown RBP7.37□□□□□ -1.23
PTPN12-213ENST00000519553 CD3EAPO15446 510 aaKnown RBP7.37□□□□□ -1.23
PTPN12-213ENST00000519553 PIAS2O75928 621 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 FGF18O76093 207 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 INMTO95050 263 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 RASAL1O95294 804 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 GRIA3P42263 894 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 ITGA8P53708 1063 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 ZNF618Q5T7W0 954 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 TEDDM1Q5T9Z0 273 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 RRAGBQ5VZM2 374 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 CATSPERGQ6ZRH7 1159 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 SPARTQ8N0X7 666 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 GPR150Q8NGU9 434 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 ATRIPQ8WXE1 791 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 BRI3BPQ8WY22 251 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 KIAA1191Q96A73 305 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 SORCS2Q96PQ0 1159 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 AGAP2Q99490 1192 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 NLRC4Q9NPP4 1024 aa7.37□□□□□ -1.23
PTPN12-213ENST00000519553 A1L4Q6 167 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 LINC00473A8K010 186 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 URI1O94763 535 aaPredicted RBP7.36□□□□□ -1.23
PTPN12-213ENST00000519553 RHOBTB3O94955 611 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 VNN1O95497 513 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 NR2F6P10588 404 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 HARSP12081 509 aaKnown RBP7.36□□□□□ -1.23
PTPN12-213ENST00000519553 ZFXP17010 805 aaPredicted RBP7.36□□□□□ -1.23
PTPN12-213ENST00000519553 TPH1P17752 444 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 HTR3AP46098 478 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 BCAT1P54687 386 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 KCNAB1Q14722 419 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 LY6KQ17RY6 165 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 SLC35G1Q2M3R5 365 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 TREML2Q5T2D2 321 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 IZUMO3Q5VZ72 239 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 KRT28Q7Z3Y7 464 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 FAM186BQ8IYM0 893 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 DEPTORQ8TB45 409 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 SOCS4Q8WXH5 440 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 CHFRQ96EP1 664 aa7.36□□□□□ -1.23
PTPN12-213ENST00000519553 FAM83DQ9H4H8 585 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms