RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 CASRP41180 1078 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 PTENP60484 403 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 ERVPABLB-1P60509 514 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 MTF1Q14872 753 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 SUZ12Q15022 739 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 ZNF77Q15935 545 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.44□□□□□ -1.229e-6■■■■□ 25
CTNNA1-216ENST00000519489 CTXN3Q4LDR2 81 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 XKR3Q5GH77 459 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 WDR45BQ5MNZ6 344 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 EOGTQ5NDL2 527 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 IL27RAQ6UWB1 636 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 PHTF2Q8N3S3 785 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 MAB21L3Q8N8X9 362 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 ATAD1Q8NBU5 361 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 SPATA20Q8TB22 786 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 ZNF564Q8TBZ8 553 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 PANK1Q8TE04 598 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 RRP36Q96EU6 259 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 OCSTAMPQ9BR26 566 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 UNC45AQ9H3U1 944 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 HELLSQ9NRZ9 838 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 TBC1D22BQ9NU19 505 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 DUS2Q9NX74 493 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 EIF2B4Q9UI10 523 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 CEP192Q8TEP8 1941 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 A0A0A0MRY4 1105 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 A0A1B0GUA9 196 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 WDR64B1ANS9 1081 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 KCNJ18B7U540 433 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 N4BP3O15049 544 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 CHMP2AO43633 222 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 PPFIA2O75334 1257 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 AP1G2O75843 785 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 LDOC1O95751 146 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 MT-CO3P00414 261 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 F11P03951 625 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 ATF6P18850 670 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 WT1P19544 449 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 AXLP30530 894 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 AFMP43652 599 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 CD97P48960 835 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 EPHB3P54753 998 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 ZXDBP98169 803 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 NMIQ13287 307 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 ZC2HC1CQ53FD0 456 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 ARHGAP15Q53QZ3 475 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 INTS6LQ5JSJ4 861 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 SYCP2LQ5T4T6 812 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 DCAF12L1Q5VU92 463 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 CENPPQ6IPU0 288 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 FERMT3Q86UX7 667 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 STKLD1Q8NE28 680 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 LRRC15Q8TF66 581 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 SSC4DQ8WTU2 575 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 HTR3CQ8WXA8 447 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 PRR11Q96HE9 360 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 CYP2S1Q96SQ9 504 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 ACOX2Q99424 681 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 UBAC1Q9BSL1 405 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 WRAP73Q9P2S5 460 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 SAMM50Q9Y512 469 aa7.43□□□□□ -1.22
CTNNA1-216ENST00000519489 TTLL8A6PVC2 850 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 MEI4A8MW99 385 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 BTBD18B2RXH4 712 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 PAPSS1O43252 624 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 SPINT1O43278 529 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 MTSS1O43312 755 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 TADA3O75528 432 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 ERLIN2O94905 339 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 AGFG2O95081 481 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 KAT7O95251 611 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 EDN1P05305 212 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 NCAM1P13591 858 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 SMARCA1P28370 1054 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 TNFSF9P41273 254 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 LSSP48449 732 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 CYP4F2P78329 520 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 CYP4A11Q02928 519 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 USP4Q13107 963 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 ZSCAN23Q3MJ62 389 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 MCMDC2Q4G0Z9 681 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 SLC27A1Q6PCB7 646 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 B3GNT9Q6UX72 402 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 TOE1Q96GM8 510 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 YTHDC1Q96MU7 727 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 FUCA2Q9BTY2 467 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 GPR174Q9BXC1 333 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 TRIM6Q9C030 488 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 DHX33Q9H6R0 707 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 GEMIN8Q9NWZ8 242 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 WSB2Q9NYS7 404 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 ANKRD6Q9Y2G4 727 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 NFE2L3Q9Y4A8 694 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 SVILO95425 2214 aa7.42□□□□□ -1.22
CTNNA1-216ENST00000519489 E2F8A0AVK6 867 aa7.41□□□□□ -1.22
CTNNA1-216ENST00000519489 MTMR11A4FU01 709 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms