RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
VPS37A-204ENST00000519381 UBE4BO95155 1302 aa16.95■□□□□ 0.3
VPS37A-204ENST00000519381 PHACTR2O75167 634 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 HOXC13P31276 330 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 GNL1P36915 607 aaPredicted RBP16.94■□□□□ 0.3
VPS37A-204ENST00000519381 PPP3CCP48454 512 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 NASPP49321 788 aaPredicted RBP16.94■□□□□ 0.3
VPS37A-204ENST00000519381 SEC13P55735 322 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 EML3Q32P44 896 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 TDRD10Q5VZ19 366 aaKnown RBP16.94■□□□□ 0.3
VPS37A-204ENST00000519381 TRAPPC11Q7Z392 1133 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 C11orf74Q86VG3 221 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 NELFCDQ8IXH7 590 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 CXorf38Q8TB03 319 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 KBTBD7Q8WVZ9 684 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 CCDC127Q96BQ5 260 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 SLITRK1Q96PX8 696 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 CGRRF1Q99675 332 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 MAGEF1Q9HAY2 307 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 VPS45Q9NRW7 570 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 CIZ1Q9ULV3 898 aaPredicted RBP16.94■□□□□ 0.3
VPS37A-204ENST00000519381 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 HELZP42694 1942 aaKnown RBP16.94■□□□□ 0.3
VPS37A-204ENST00000519381 PTPRJQ12913 1337 aa16.94■□□□□ 0.3
VPS37A-204ENST00000519381 K7ELQ4 463 aaPredicted RBP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 LEFTY2O00292 366 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 SLC9A3R1O14745 358 aaPredicted RBP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 LMO2P25791 158 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 RAP1GAPP47736 663 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 LIMK1P53667 647 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 CREB5Q02930 508 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 WDR72Q3MJ13 1102 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 NAIF1Q69YI7 327 aaPredicted RBP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 DDX42Q86XP3 938 aaKnown RBP eCLIP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 XXYLT1Q8NBI6 393 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 LINC00301Q8NCQ3 95 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 MYCBPAPQ8TBZ2 947 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 PCED1BQ96HM7 432 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 ELOVL4Q9GZR5 314 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 FBRSL1Q9HCM7 1045 aaKnown RBP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 AGPAT3Q9NRZ7 376 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
VPS37A-204ENST00000519381 TPRP12270 2363 aaKnown RBP16.93■□□□□ 0.3
VPS37A-204ENST00000519381 A8MXQ7 604 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 F8VP50 259 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 CUTAO60888 179 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 PPP6R2O75170 966 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 ALDH1A2O94788 518 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 TCF3P15923 654 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 BIRC3Q13489 604 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 PLK5Q496M5 336 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 USP39Q53GS9 565 aaKnown RBP16.92■□□□□ 0.3
VPS37A-204ENST00000519381 C2orf27AQ580R0 203 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 RNF43Q68DV7 783 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 SCARA3Q6AZY7 606 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
VPS37A-204ENST00000519381 MED10Q9BTT4 135 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 KBTBD4Q9NVX7 518 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 POLR3BQ9NW08 1133 aaPredicted RBP16.92■□□□□ 0.3
VPS37A-204ENST00000519381 SMPD4Q9NXE4 827 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 FAM13BQ9NYF5 915 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 NXF1Q9UBU9 619 aaKnown RBP16.92■□□□□ 0.3
VPS37A-204ENST00000519381 CPQQ9Y646 472 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
VPS37A-204ENST00000519381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 CLIC2O15247 247 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 TACC1O75410 805 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 ADH1CP00326 375 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 MBL2P11226 248 aaPredicted RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 TRIM21P19474 475 aaKnown RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 CYP24A1Q07973 514 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 PSMD6Q15008 389 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 STPG1Q5TH74 334 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 ANO7Q6IWH7 933 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 PDZD8Q8NEN9 1154 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 ZC3H10Q96K80 434 aaKnown RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 MRPL45Q9BRJ2 306 aaKnown RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 TPSD1Q9BZJ3 242 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 LINC00597Q9H2U6 94 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 SMOC1Q9H4F8 434 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
VPS37A-204ENST00000519381 CACNA1BQ00975 2339 aa16.91■□□□□ 0.3
VPS37A-204ENST00000519381 ACACBO00763 2458 aa16.9■□□□□ 0.3
VPS37A-204ENST00000519381 EXOC3O60645 756 aa16.9■□□□□ 0.3
VPS37A-204ENST00000519381 RTN3O95197 1032 aaPredicted RBP16.9■□□□□ 0.3
VPS37A-204ENST00000519381 YEATS4O95619 227 aa16.9■□□□□ 0.3
VPS37A-204ENST00000519381 CAVIN2O95810 425 aa16.9■□□□□ 0.3
VPS37A-204ENST00000519381 APODP05090 189 aa16.9■□□□□ 0.3
VPS37A-204ENST00000519381 PTPN1P18031 435 aaKnown RBP16.9■□□□□ 0.3
VPS37A-204ENST00000519381 USP46P62068 366 aa16.9■□□□□ 0.3
VPS37A-204ENST00000519381 NOP14P78316 857 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms