RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DNAJC24Q6P3W2 148 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 ADAT2Q7Z6V5 191 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 TMEM173Q86WV6 379 aaPredicted RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 ZDHHC14Q8IZN3 488 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 CPXM1Q96SM3 734 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 TMEM175Q9BSA9 504 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 CWH43Q9H720 699 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 GDF3Q9NR23 364 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 MARCH5Q9NX47 278 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 OGFRQ9NZT2 677 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 SLC4A7Q9Y6M7 1214 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 TSC2P49815 1807 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 BHMG1C9JSJ3 638 aaPredicted RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 ATP2C2O75185 946 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 TKTP29401 623 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 MAN1A1P33908 653 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 GPD2P43304 727 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 TAS2R40P59535 323 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 ZNF252P-AS1Q0IIN9 211 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 SEL1L2Q5TEA6 688 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 LCLAT1Q6UWP7 414 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 CEP57Q86XR8 500 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 CMTR2Q8IYT2 770 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 C3orf20Q8ND61 904 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 AENQ8WTP8 325 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 SLITRK6Q9H5Y7 841 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 IP6K2Q9UHH9 426 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 DSEQ9UL01 958 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 PCDHB8Q9UN66 801 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 M0QYV0 167 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 GABRDO14764 452 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 GJB5O95377 273 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 PAX3P23760 479 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 PLA2G4AP47712 749 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 LHX1P48742 406 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 OGDHQ02218 1023 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 GUCY2DQ02846 1103 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 CCDC142Q17RM4 750 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 MAP9Q49MG5 647 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 FAM171A1Q5VUB5 890 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 OVOS1Q6IE37 1185 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 HDXQ7Z353 690 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 UBA3Q8TBC4 463 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 BCL7CQ8WUZ0 217 aaPredicted RBP15.25■□□□□ 0.03
CLN8-204ENST00000519254 C18orf8Q96DM3 657 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 TNIP3Q96KP6 325 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 B3GALT6Q96L58 329 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 MCEEQ96PE7 176 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 DNAI2Q9GZS0 605 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 STRIP2Q9ULQ0 834 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 NR2E3Q9Y5X4 410 aa15.25■□□□□ 0.03
CLN8-204ENST00000519254 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 ARHGEF37A1IGU5 675 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 ERBB2P04626 1255 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 CCDC130P13994 396 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 ATP2A2P16615 1042 aaKnown RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 GABRB2P47870 512 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 TAP1Q03518 808 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 YWHAHQ04917 246 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 TRADDQ15628 312 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 GOLGA7BQ2TAP0 167 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 PPP1R26Q5T8A7 1209 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 FUT10Q6P4F1 479 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 XYLT1Q86Y38 959 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 SLC13A5Q86YT5 568 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 B3GALNT2Q8NCR0 500 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 CASKIN2Q8WXE0 1202 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 SYT15Q9BQS2 421 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 GPR62Q9BZJ7 368 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 AMACRQ9UHK6 382 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 TSPAN16Q9UKR8 245 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.031e-10■■■■■ 241.2
CLN8-204ENST00000519254 ESYT3A0FGR9 886 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 SIGLEC16A6NMB1 481 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 PSTPIP1O43586 416 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 CYP11A1P05108 521 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 FAM163BP0C2L3 166 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 TYMPP19971 482 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 ADORA2BP29275 332 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 MAGEA10P43363 369 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 CARSP49589 748 aaKnown RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 PDCLQ13371 301 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 ZNF268Q14587 947 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 CASP8Q14790 479 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 SIX1Q15475 284 aaPredicted RBP15.24■□□□□ 0.03
CLN8-204ENST00000519254 MDH1BQ5I0G3 518 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 KIAA0319Q5VV43 1072 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 DCUN1D2Q6PH85 259 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 KCNT2Q6UVM3 1135 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 HERC6Q8IVU3 1022 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 PRELID2Q8N945 189 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms