RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TFAP4Q01664 338 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 TRIML2Q8N7C3 387 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 GLIS1Q8NBF1 620 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 RAB3IL1Q8TBN0 382 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 C7orf26Q96N11 449 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 PAFAH2Q99487 392 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 DCP1AQ9NPI6 582 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-208ENST00000519004 NCKIPSDQ9NZQ3 722 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 FETUBQ9UGM5 382 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 EBF1Q9UH73 591 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 RBMX2Q9Y388 322 aaKnown RBP14.13□□□□□ -0.15
PABPC1-208ENST00000519004 MAST2Q6P0Q8 1798 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 AQP9O43315 295 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 BANF1O75531 89 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 SULT1C4O75897 302 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 RFC4P35249 363 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 AQP5P55064 265 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 CTBSQ01459 385 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 PDE1CQ14123 709 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-208ENST00000519004 BMT2Q1RMZ1 405 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 TCHHL1Q5QJ38 904 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-208ENST00000519004 IL23RQ5VWK5 629 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 CES4AQ5XG92 561 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 DZIP1Q86YF9 867 aaKnown RBP14.13□□□□□ -0.15
PABPC1-208ENST00000519004 HPS6Q86YV9 775 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 CPNE9Q8IYJ1 553 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 TRPC4APQ8TEL6 797 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 DCAKDQ8WVC6 231 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 ANKRD36BP1Q96IX9 119 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 KCNQ5Q9NR82 932 aa14.13□□□□□ -0.15
PABPC1-208ENST00000519004 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 RCVRNP35243 200 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 TRPC1P48995 793 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 KCNA1Q09470 495 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 PHKG1Q16816 387 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 ARL13BQ3SXY8 428 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 GALNT4Q8N4A0 578 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 EFCAB3Q8N7B9 438 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 TRIM11Q96F44 468 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 APOPT1Q96IL0 206 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 DCUN1D5Q9BTE7 237 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 HEMGNQ9BXL5 484 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 CDH7Q9ULB5 785 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 TTLL3Q9Y4R7 772 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 SQORQ9Y6N5 450 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 EMSYQ7Z589 1322 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 SDR42E2A6NKP2 422 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 TMX2-CTNND1H3BSU7 103 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 XPO1O14980 1071 aaKnown RBP14.12□□□□□ -0.15
PABPC1-208ENST00000519004 FBXO21O94952 628 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 SEPT6Q14141 434 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 TFDP1Q14186 410 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 GPR180Q86V85 440 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
PABPC1-208ENST00000519004 ANKMY2Q8IV38 441 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 TBC1D15Q8TC07 691 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 PTCD2Q8WV60 388 aaKnown RBP14.12□□□□□ -0.15
PABPC1-208ENST00000519004 ACAP3Q96P50 834 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 IKZF4Q9H2S9 585 aa14.12□□□□□ -0.15
PABPC1-208ENST00000519004 ZNF395Q9H8N7 513 aaPredicted RBP14.12□□□□□ -0.15
PABPC1-208ENST00000519004 HERC5Q9UII4 1024 aaKnown RBP14.12□□□□□ -0.15
PABPC1-208ENST00000519004 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 TGFB1I1O43294 461 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 PROCP04070 461 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ZSCAN5DPP0CG00 497 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 FDX1P10109 184 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 RALAP11233 206 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 PTPN2P17706 415 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 NDST2P52849 883 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 YWHAGP61981 247 aaKnown RBP eCLIP14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ADGRE1Q14246 886 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 FAM209AQ5JX71 171 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 RARS2Q5T160 578 aaKnown RBP14.11□□□□□ -0.15
PABPC1-208ENST00000519004 EGFLAMQ63HQ2 1017 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 VASH1Q7L8A9 365 aaPredicted RBP14.11□□□□□ -0.15
PABPC1-208ENST00000519004 RSPH3Q86UC2 560 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 GRIN3AQ8TCU5 1115 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ISOC1Q96CN7 298 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ERLEC1Q96DZ1 483 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 SERAC1Q96JX3 654 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 RUSC1Q9BVN2 902 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ANO3Q9BYT9 981 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 BCAS3Q9H6U6 928 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 OLFML3Q9NRN5 406 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 GTF3C4Q9UKN8 822 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 RNF11Q9Y3C5 154 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 TRPM3Q9HCF6 1732 aaPredicted RBP14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ASTN2O75129 1339 aaPredicted RBP14.11□□□□□ -0.15
PABPC1-208ENST00000519004 MYO3BQ8WXR4 1341 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ESYT2A0FGR8 921 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 USP17L3A6NCW0 530 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 USP17L4A6NCW7 530 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 ATP5BP06576 529 aaKnown RBP14.11□□□□□ -0.15
PABPC1-208ENST00000519004 TRIM49P0CI25 452 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 TRIM49CP0CI26 452 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 KCNA4P22459 653 aa14.11□□□□□ -0.15
PABPC1-208ENST00000519004 PSMC2P35998 433 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms