RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 POLMQ9NP87 494 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 GTF3C4Q9UKN8 822 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLC6A14Q9UN76 642 aa13.24□□□□□ -0.29
TRAPPC9-204ENST00000518723 MYMKA6NI61 221 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 SGK1O00141 431 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 LEFTY2O00292 366 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 GABRDO14764 452 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 KLF8O95600 359 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 ACAT1P24752 427 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 PCSK1P29120 753 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 ADSSP30520 456 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 POLR2BP30876 1174 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 KIR2DL1P43626 348 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 LHX1P48742 406 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLC7A9P82251 487 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 POSTNQ15063 836 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 CCDC142Q17RM4 750 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 DUOXA1Q1HG43 343 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 ZNF423Q2M1K9 1284 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 EOGTQ5NDL2 527 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 RABEPKQ7Z6M1 372 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 RAB44Q7Z6P3 723 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 SPATA2LQ8IUW3 424 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 ADGRG2Q8IZP9 1017 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 HDDC3Q8N4P3 179 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 FRMD1Q8N878 549 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 C1orf127Q8N9H9 656 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 CXorf38Q8TB03 319 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 ZSCAN31Q96LW9 406 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 PNKPQ96T60 521 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 GPSM3Q9Y4H4 160 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 PTPRDP23468 1912 aa13.23□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 EIF5BO60841 1220 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 ADAM23O75077 832 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 KAT7O95251 611 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 OLFM2O95897 454 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 APODP05090 189 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 ITGB3P05106 788 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 CFIP05156 583 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 SERPINF2P08697 491 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 ITPKAP23677 461 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 MESP2Q0VG99 397 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 DHCR24Q15392 516 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 VSTM1Q6UX27 236 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 OSTM1Q86WC4 334 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 TOP6BLQ8N6T0 577 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 TTLL2Q9BWV7 592 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 ITGA11Q9UKX5 1188 aa13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 TNRC6BQ9UPQ9 1833 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 FLNBO75369 2602 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-204ENST00000518723 ATXN2Q99700 1313 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 AP5Z1O43299 807 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 OPHN1O60890 802 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 KRT18P05783 430 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 TIE1P35590 1138 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 GRIA2P42262 883 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLC6A11P48066 632 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 PPP3CCP48454 512 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 WNT7BP56706 349 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 FAM193AP78312 1265 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 TFAMQ00059 246 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 MCM6Q14566 821 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 SLC36A4Q6YBV0 504 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 BRSK2Q8IWQ3 736 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 ADGRF2Q8IZF7 708 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 CACTINQ8WUQ7 758 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 HMGB4Q8WW32 186 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 RAD54LQ92698 747 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 ZHX3Q9H4I2 956 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 DNAAF2Q9NVR5 837 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 EHD2Q9NZN4 543 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 TRPM5Q9NZQ8 1165 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 SNX9Q9Y5X1 595 aa13.21□□□□□ -0.29
TRAPPC9-204ENST00000518723 TCHHQ07283 1943 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms