RNA–Protein interactions for RNA: ENST00000518531.5

TNFRSF10B-203, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 3

Gene TNFRSF10B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-203ENST00000518531 ATXN2Q99700 1313 aaKnown RBP16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SPAARA0A1B0GVQ0 90 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SGK1O00141 431 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LEFTY2O00292 366 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ALDH1A2O94788 518 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MRPS21P82921 87 aaKnown RBP16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LRSAM1Q6UWE0 723 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SYT12Q8IV01 421 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ADGRF2Q8IZF7 708 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 IL17RCQ8NAC3 791 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 TXNDC5Q8NBS9 432 aaKnown RBP16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 CXorf38Q8TB03 319 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 FUBP3Q96I24 572 aaKnown RBP eCLIP16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SPACA7Q96KW9 195 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 GDAP2Q9NXN4 497 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MSRB2Q9Y3D2 182 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SNX9Q9Y5X1 595 aa16.8■□□□□ 0.28
TNFRSF10B-203ENST00000518531 GABRDO14764 452 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MAP3K13O43283 966 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ATP2C2O75185 946 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PPP1R37O75864 691 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 KLF8O95600 359 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PCSK1P29120 753 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MAGEA11P43364 429 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SLC6A11P48066 632 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PDE6CP51160 858 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SIM1P81133 766 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 POSTNQ15063 836 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PIP4P1Q86T03 277 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SFR1Q86XK3 245 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 BRSK2Q8IWQ3 736 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SPATA18Q8TC71 538 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
TNFRSF10B-203ENST00000518531 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MYMKA6NI61 221 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 H3BQV1 296 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SCAMP3O14828 347 aaKnown RBP16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 TIE1P35590 1138 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LHX1P48742 406 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 USP46P62068 366 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 GRIN1Q05586 938 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 KCNA1Q09470 495 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 DHCR24Q15392 516 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SOWAHAQ2M3V2 549 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MAP7D1Q3KQU3 841 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LYSMD4Q5XG99 296 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 FAM171BQ6P995 826 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SLC23A3Q6PIS1 610 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 C12orf40Q86WS4 652 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 CSGALNACT2Q8N6G5 542 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 TOP6BLQ8N6T0 577 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SPATA17Q96L03 361 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PNKPQ96T60 521 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ZDHHC4Q9NPG8 344 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 FSCN3Q9NQT6 498 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 RBAKQ9NYW8 714 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LAMA5O15230 3695 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ADAM23O75077 832 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 KAT7O95251 611 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 KRT19P08727 400 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PFKLP17858 780 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ITPKAP23677 461 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PSMC1P62191 440 aaKnown RBP16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 EMC10Q5UCC4 262 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PEAR1Q5VY43 1037 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 LMBRD2Q68DH5 695 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 C4orf50Q6ZRC1 276 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 ADGRG2Q8IZP9 1017 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 CACTINQ8WUQ7 758 aaKnown RBP16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 HMGB4Q8WW32 186 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 MYLPFQ96A32 169 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 KIF2CQ99661 725 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SYT15Q9BQS2 421 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 STRA6Q9BX79 667 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 RNF38Q9H0F5 515 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 POLMQ9NP87 494 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 SMPD4Q9NXE4 827 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 TRPM5Q9NZQ8 1165 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PILRBQ9UKJ0 227 aa16.77■□□□□ 0.28
TNFRSF10B-203ENST00000518531 PLXND1Q9Y4D7 1925 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 TCRBV21S2A2A0A5A6 115 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 ZNF840PA6NDX5 716 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 UPK3BL1B0FP48 263 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 UPK3BL2E5RIL1 263 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 APODP05090 189 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 CFIP05156 583 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 BDNFP23560 247 aa16.76■□□□□ 0.27
TNFRSF10B-203ENST00000518531 LMO2P25791 158 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms