RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 MAP7D1Q3KQU3 841 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 CFAP221Q4G0U5 840 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 SOWAHCQ53LP3 525 aaPredicted RBP12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 INTS6LQ5JSJ4 861 aaKnown RBP12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 SLFN12LQ6IEE8 588 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 SLC36A4Q6YBV0 504 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 SPATA2LQ8IUW3 424 aaPredicted RBP12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 IL17RCQ8NAC3 791 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 COL26A1Q96A83 441 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 FUBP3Q96I24 572 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 PNMA5Q96PV4 448 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 REEP2Q9BRK0 252 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 PARVGQ9HBI0 331 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 DDX43Q9NXZ2 648 aaKnown RBP12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
TMEM55A-202ENST00000518359 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 TCRBV21S2A2A0A5A6 115 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 ARHGAP33O14559 1287 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 TRAK2O60296 914 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 ADH1CP00326 375 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 CAPNS1P04632 268 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 CYP17A1P05093 508 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 PCSK1P29120 753 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 RESTQ13127 1097 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 IL17AQ16552 155 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 COL28A1Q2UY09 1125 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 TRMT11Q7Z4G4 463 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 FILIP1Q7Z7B0 1213 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 FRMD1Q8N878 549 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 PLIN2Q99541 437 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 CAPN10Q9HC96 672 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 ARHGEF4Q9NR80 690 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 TRPM5Q9NZQ8 1165 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 AGO2Q9UKV8 859 aaKnown RBP12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 PTPRBP23467 1997 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 ACACAQ13085 2346 aa12.54□□□□□ -0.4
TMEM55A-202ENST00000518359 SMG1Q96Q15 3661 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 PLXNB3Q9ULL4 1909 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 LEFTY2O00292 366 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 TBCAO75347 108 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 KRT18P05783 430 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ACAT1P24752 427 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 GRIA2P42262 883 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 MAGEA11P43364 429 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 TNFRSF4P43489 277 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 LHX1P48742 406 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ZNF131P52739 623 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 FAM193AP78312 1265 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 DHCR24Q15392 516 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 TRIP6Q15654 476 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 GAB4Q2WGN9 574 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 PREPLQ4J6C6 727 aaPredicted RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ADAMTS14Q8WXS8 1223 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 CEP295NLQ96MC4 621 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 DNAAF2Q9NVR5 837 aaKnown RBP12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 L1RE1Q9UN81 338 aa12.53□□□□□ -0.4
TMEM55A-202ENST00000518359 A0A1W2PQD8 194 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 ANTXRLA6NF34 631 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 CD59P13987 128 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 ANXA13P27216 316 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 KIR2DL1P43626 348 aaPredicted RBP12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 PPP3CCP48454 512 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 ATP2C1P98194 919 aaPredicted RBP12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 GTF2BQ00403 316 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 KDSRQ06136 332 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 VSTM1Q6UX27 236 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 LRRC52Q8N7C0 313 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 LRRC15Q8TF66 581 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 CACTINQ8WUQ7 758 aaKnown RBP12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 CALML4Q96GE6 196 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 SPATA17Q96L03 361 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 PKMYT1Q99640 499 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 LIMCH1Q9UPQ0 1083 aa12.52□□□□□ -0.41
TMEM55A-202ENST00000518359 APOBEC2Q9Y235 224 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms