RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 VSTM1Q6UX27 236 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 FAM35AQ86V20 835 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 SCN4BQ8IWT1 228 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 ANP32BQ92688 251 aaKnown RBP13.76□□□□□ -0.21
PABPC1-205ENST00000518196 SMARCD1Q96GM5 515 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 DZANK1Q9NVP4 752 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 SLC27A5Q9Y2P5 690 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 PTPRDP23468 1912 aa13.76□□□□□ -0.21
PABPC1-205ENST00000518196 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-205ENST00000518196 AP1G2O75843 785 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 SEC24AO95486 1093 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 VNN2O95498 520 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 LRG1P02750 347 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 C8AP07357 584 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 FAM200BP0CF97 657 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 CYP11B1P15538 503 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 CYP2F1P24903 491 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ANXA13P27216 316 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 KRT9P35527 623 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 GRIK1P39086 918 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 CDR1P51861 262 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ARID5AQ03989 594 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ADAM15Q13444 863 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 PPM1LQ5SGD2 360 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 LCLAT1Q6UWP7 414 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 TMEM184AQ6ZMB5 413 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 SLC47A2Q86VL8 602 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 FUKQ8N0W3 1084 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 SLC7A14Q8TBB6 771 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ZNF606Q8WXB4 792 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 TFAP2BQ92481 460 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 SYN2Q92777 582 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-205ENST00000518196 SEPT5Q99719 369 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-205ENST00000518196 DUSP16Q9BY84 665 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 ZNF518BQ9C0D4 1074 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 PDCL3Q9H2J4 239 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 AIPL1Q9NZN9 384 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 INSL5Q9Y5Q6 135 aa13.75□□□□□ -0.21
PABPC1-205ENST00000518196 O00370 1275 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 CALCAP01258 141 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 BCAT1P54687 386 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 EPHB3P54753 998 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 KCNC3Q14003 757 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 VEPH1Q14D04 833 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 CCDC85BQ15834 202 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 PAQR9Q6ZVX9 377 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 CNGA4Q8IV77 575 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 ELMOD1Q8N336 334 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 OR8K1Q8NGG5 319 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 SFXN1Q9H9B4 322 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 DMAP1Q9NPF5 467 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 ZNHIT6Q9NWK9 470 aaKnown RBP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 YIPF1Q9Y548 306 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 CEP83Q9Y592 693 aa13.74□□□□□ -0.21
PABPC1-205ENST00000518196 BZW2Q9Y6E2 419 aaKnown RBP13.74□□□□□ -0.21
PABPC1-205ENST00000518196 M0QYV0 167 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 MICAL2O94851 1124 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 NPR3P17342 541 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 HOXB8P17481 243 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-205ENST00000518196 HOXA9P31269 272 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 MAP3K7CLP57077 242 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 USP46P62068 366 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 KLHL30Q0D2K2 578 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 BST2Q10589 180 aaKnown RBP13.73□□□□□ -0.21
PABPC1-205ENST00000518196 TWF1Q12792 350 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 TAF12Q16514 161 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 MEA1Q16626 185 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 IRF2BP2Q7Z5L9 587 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 TTC9BQ8N6N2 239 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 VN1R2Q8NFZ6 395 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 UBA3Q8TBC4 463 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 EPS8L1Q8TE68 723 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 PPM1EQ8WY54 764 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 PABPC5Q96DU9 382 aaKnown RBP13.73□□□□□ -0.21
PABPC1-205ENST00000518196 C8orf48Q96LL4 319 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 CEP295NLQ96MC4 621 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 ZNF512Q96ME7 567 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-205ENST00000518196 SMOQ99835 787 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 ACP6Q9NPH0 428 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 IMPACTQ9P2X3 320 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 PCDHGC3Q9UN70 934 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 ASB3Q9Y575 518 aa13.73□□□□□ -0.21
PABPC1-205ENST00000518196 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms