RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 MYCLP1P12525 358 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 LPOP22079 712 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TNFRSF8P28908 595 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TACR3P29371 465 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 COPB1P53618 953 aaKnown RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 LOXL3P58215 753 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 HSF1Q00613 529 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 DSC2Q02487 901 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PPATQ06203 517 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 STRN3Q13033 797 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 IQCB1Q15051 598 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 DHCR24Q15392 516 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 INPP5JQ15735 1006 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PFKFB3Q16875 520 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 CT47A1Q5JQC4 288 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 FAM160B1Q5W0V3 765 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 RANBP10Q6VN20 620 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SLC39A5Q6ZMH5 540 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 RAB11FIP4Q86YS3 637 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SFTPA1Q8IWL2 248 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 CMIPQ8IY22 773 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 FAM109AQ8N4B1 249 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SPEM1Q8N4L4 309 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 CPA6Q8N4T0 437 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 FAM46DQ8NEK8 389 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 B4GALNT2Q8NHY0 566 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 IFI44Q8TCB0 444 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 JPH3Q8WXH2 748 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 NEUROG1Q92886 237 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TNPO1Q92973 898 aaKnown RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ZC3H10Q96K80 434 aaKnown RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 VKORC1Q9BQB6 163 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PTDSS2Q9BVG9 487 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ARHGAP39Q9C0H5 1083 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TINAGL1Q9GZM7 467 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 C14orf119Q9NWQ9 140 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ETAA1Q9NY74 926 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 DNMT3BQ9UBC3 853 aaKnown RBP1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 WNT16Q9UBV4 365 aa1.42□□□□□ -2.18
RNU6-1258P-201ENST00000516911 NOTCH3Q9UM47 2321 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ERI2A8K979 691 aaKnown RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 E9PSI1 815 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 F2RL2O00254 374 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 NTN3O00634 580 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TBC1D4O60343 1298 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 BRINP1O60477 761 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PAPSS2O95340 614 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ARIH2O95376 493 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 BPIP17213 487 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TBXAS1P24557 533 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PPIFP30405 207 aaKnown RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PHKA1P46020 1223 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PIK3CGP48736 1102 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 E2F1Q01094 437 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SRSF1Q07955 248 aaKnown RBP eCLIP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TROAPQ12815 778 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 MTX1Q13505 466 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 BOP1Q14137 746 aaKnown RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ACAP2Q15057 778 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 FAM110CQ1W6H9 321 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 IZUMO4Q1ZYL8 232 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 LONRF3Q496Y0 759 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 KHDC1Q4VXA5 237 aaKnown RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TMTC4Q5T4D3 741 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 DEPDC1Q5TB30 811 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 NADSYN1Q6IA69 706 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 RGS7BPQ6MZT1 257 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TRAPPC11Q7Z392 1133 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TTC7BQ86TV6 843 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SKAP1Q86WV1 359 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SPATA2LQ8IUW3 424 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 LIX1LQ8IVB5 337 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 PELI3Q8N2H9 469 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 OSCP1Q8WVF1 389 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ASB5Q8WWX0 329 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ATG4AQ8WYN0 398 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SLC46A1Q96NT5 459 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 LENG8Q96PV6 779 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 DNAJC2Q99543 621 aaKnown RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 VRK1Q99986 396 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TUBB6Q9BUF5 446 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 RBM38Q9H0Z9 239 aaKnown RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 CDT1Q9H211 546 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 C6orf106Q9H6K1 298 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 GPR35Q9HC97 309 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SEMA4BQ9NPR2 832 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SNX15Q9NRS6 342 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 CCM2LQ9NUG4 571 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 FANCLQ9NW38 375 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ANAPC4Q9UJX5 808 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 MAPRE3Q9UPY8 281 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 SHOC2Q9UQ13 582 aa1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1258P-201ENST00000516911 TRIP12Q14669 1992 aaPredicted RBP1.4□□□□□ -2.19
RNU6-1258P-201ENST00000516911 TCRBV5S1A1TA0A578 114 aa1.4□□□□□ -2.19
RNU6-1258P-201ENST00000516911 ANTXRLA6NF34 631 aa1.4□□□□□ -2.19
RNU6-1258P-201ENST00000516911 MYO1CO00159 1063 aa1.4□□□□□ -2.19
RNU6-1258P-201ENST00000516911 CTIFO43310 598 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms