RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 SPATA9Q9BWV2 254 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 BACH2Q9BYV9 841 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 ZNF696Q9H7X3 374 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 DDX31Q9H8H2 851 aaKnown RBP0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 MANSC1Q9H8J5 431 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 TMEM45AQ9NWC5 275 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 PAK5Q9P286 719 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 PRKAG3Q9UGI9 489 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 ANAPC4Q9UJX5 808 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 POU2F3Q9UKI9 436 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 ADAM18Q9Y3Q7 739 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 SPO11Q9Y5K1 396 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 NUMBLQ9Y6R0 609 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 OTOGLQ3ZCN5 2332 aa0.39□□□□□ -2.35
RNU6-557P-201ENST00000516842 SPATA31A3Q5VYP0 1347 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 A0A1B0GVT2 93 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 E7ENX8 843 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 SLC16A3O15427 465 aaKnown RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 ATG13O75143 517 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 PHF2O75151 1096 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 AMY1AP04745 511 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 LPOP22079 712 aaPredicted RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 CD6P30203 668 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 DLK1P80370 383 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 TAP2Q03519 686 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 PPP3CAQ08209 521 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 ILF3Q12906 894 aaKnown RBP eCLIP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 TAF2Q6P1X5 1199 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 DPY19L3Q6ZPD9 716 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 C15orf39Q6ZRI6 1047 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 H1FNTQ75WM6 255 aaPredicted RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 MARK2Q7KZI7 788 aaKnown RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 RSRC2Q7L4I2 434 aaKnown RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 EPHX4Q8IUS5 362 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 FAM109AQ8N4B1 249 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 ANKRD52Q8NB46 1076 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 GPR156Q8NFN8 814 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 CCHCR1Q8TD31 782 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 GLG1Q92896 1179 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 RNPC3Q96LT9 517 aaKnown RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 FYTTD1Q96QD9 318 aaKnown RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 PELI2Q9HAT8 420 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 DMRT3Q9NQL9 472 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 ABCB10Q9NRK6 738 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 LANCL2Q9NS86 450 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 OXSMQ9NWU1 459 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 SAMD15Q9P1V8 674 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 KIAA1522Q9P206 1035 aaPredicted RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 FNIP2Q9P278 1114 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 TP53TG3Q9ULZ0 132 aa0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 SIRT4Q9Y6E7 314 aaPredicted RBP0.38□□□□□ -2.35
RNU6-557P-201ENST00000516842 CACNA1FO60840 1977 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 A0A0G2JK05 382 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 RPS10-NUDT3A0A1W2PQS6 291 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 INAFM1C9JVW0 142 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 AP4M1O00189 453 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 POLRMTO00411 1230 aaKnown RBP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 TLX3O43711 291 aaPredicted RBP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ZC3H11AO75152 810 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 VPS4BO75351 444 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 GPR32O75388 356 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ARIH2O95376 493 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 HOXC6P09630 235 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 HNRNPA1P09651 372 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 KRTAP1-4P0C5Y4 121 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 CD40P25942 277 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ALDH4A1P30038 563 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 SLC6A9P48067 706 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 HLCSP50747 726 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 CDK17Q00537 523 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 PIGFQ07326 219 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 GRSF1Q12849 480 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 MTM1Q13496 603 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 DDR2Q16832 855 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 TEDDM1Q5T9Z0 273 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 RANBP10Q6VN20 620 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 CREB3L2Q70SY1 520 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 RSPH3Q86UC2 560 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 LMNTD1Q8N9Z9 388 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 PSD4Q8NDX1 1056 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 RP9Q8TA86 221 aaKnown RBP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 HOXB13Q92826 284 aaPredicted RBP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ORAI3Q9BRQ5 295 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 UBXN6Q9BZV1 441 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 KCTD10Q9H3F6 313 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ABHD16BQ9H3Z7 469 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 TMEM140Q9NV12 185 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 PLK2Q9NYY3 685 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 LPAR3Q9UBY5 353 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 MRPS23Q9Y3D9 190 aaKnown RBP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 PTGDR2Q9Y5Y4 395 aa0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 ATXN2Q99700 1313 aaKnown RBP0.37□□□□□ -2.35
RNU6-557P-201ENST00000516842 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 A1L4Q6 167 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 C2CD4BA6NLJ0 364 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 NPTXRO95502 500 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 FAM153BP0C7A2 387 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 FGF5P12034 268 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 PRKCSHP14314 528 aaPredicted RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms