RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CDC20BQ86Y33 519 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 SRBD1Q8N5C6 995 aaKnown RBP-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 GAB3Q8WWW8 586 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 STON2Q8WXE9 905 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 LENG8Q96PV6 779 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 SCNM1Q9BWG6 230 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 PLEKHA4Q9H4M7 779 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 ARHGEF4Q9NR80 690 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF275Q9NSD4 429 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 RBM12Q9NTZ6 932 aaKnown RBP-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 TMEM45AQ9NWC5 275 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 HIF1ANQ9NWT6 349 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 PCDHA9Q9Y5H5 950 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 INAFM1C9JVW0 142 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 F5H697 171 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 IFNL4K9M1U5 179 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 AQP7O14520 342 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 PPM1DO15297 605 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 IGKV3-15P01624 115 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 PFKMP08237 780 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 FGFR1P11362 822 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 AMD1P17707 334 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 NR1D1P20393 614 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 FPR1P21462 350 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 DRG2P55039 364 aaKnown RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 GPSM2P81274 684 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 XPCQ01831 940 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 EPHA7Q15375 998 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 RNF212Q495C1 297 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 EAPPQ56P03 285 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 Q5PR19 223 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 TREML2Q5T2D2 321 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 ESRP1Q6NXG1 681 aaKnown RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 TRMT1LQ7Z2T5 733 aaKnown RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 ERC1Q8IUD2 1116 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM178BQ8IXR5 827 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM217AQ8IXS0 508 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 LRRC71Q8N4P6 559 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 DEPTORQ8TB45 409 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 KLHL29Q96CT2 875 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 FYTTD1Q96QD9 318 aaKnown RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 OSBPL9Q96SU4 736 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 PIMREGQ9BSJ6 248 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF518BQ9C0D4 1074 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 TXNRD2Q9NNW7 524 aa-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 EVLQ9UI08 416 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-539P-201ENST00000516665 A0A1B0GVT2 93 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 TCRBV7S2A1N4TA0A589 114 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZC3H11AO75152 810 aaKnown RBP eCLIP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 GCATO75600 419 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 KRT37O76014 449 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 SORBS2O94875 1100 aaKnown RBP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 WDR47O94967 919 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 RXRAP19793 462 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 TIMP3P35625 211 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 KCNJ4P48050 445 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 CLK1P49759 484 aaKnown RBP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 NRG3P56975 720 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC8A3P57103 927 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 PHEXP78562 749 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF844Q08AG5 666 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 BOP1Q14137 746 aaKnown RBP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 VPS53Q5VIR6 699 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 NSMFQ6X4W1 530 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 SEM1Q6ZVN7 128 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 Q6ZWC4 215 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 PARS2Q7L3T8 475 aaKnown RBP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 PHYKPLQ8IUZ5 450 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF440Q8IYI8 595 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 C7orf31Q8N865 590 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 POC1AQ8NBT0 407 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 ADAMTS14Q8WXS8 1223 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 RFT1Q96AA3 541 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 CCDC97Q96F63 343 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 FOXN4Q96NZ1 517 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 WDR24Q96S15 920 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 TRIM15Q9C019 465 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 DCLK3Q9C098 648 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 PDZD7Q9H5P4 517 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 CAPN10Q9HC96 672 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 PRDM8Q9NQV8 689 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 TFCP2L1Q9NZI6 479 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 ANAPC4Q9UJX5 808 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 TCF19Q9Y242 345 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 PTGDR2Q9Y5Y4 395 aa-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 FRMPD2Q68DX3 1309 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-539P-201ENST00000516665 KLHL33A6NCF5 533 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 C2CD4BA6NLJ0 364 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 BTBD19C9JJ37 291 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 E7ENX8 843 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 M0R2C6 588 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 NRP2O60462 931 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC22A3O75751 556 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 TJP3O95049 919 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 FESP07332 822 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 MTHFD1P11586 935 aaKnown RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF32P17041 273 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 XPAP23025 273 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC6A4P31645 630 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SOX9P48436 509 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms