RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ZNF547Q8IVP9 402 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF440Q8IYI8 595 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 FAM169BQ8N8A8 192 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 TBC1D15Q8TC07 691 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 STON2Q8WXE9 905 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 RFT1Q96AA3 541 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 SCRT1Q9BWW7 348 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 CIPCQ9C0C6 399 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 POFUT1Q9H488 388 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 PRDM8Q9NQV8 689 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF275Q9NSD4 429 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 DIAPH3Q9NSV4 1193 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 USP18Q9UMW8 372 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 FRMPD2Q68DX3 1309 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 KMT2BQ9UMN6 2715 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 FBN2P35556 2912 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 SRRM4A7MD48 611 aaKnown RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 B2RBV5 119 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 F5H697 171 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ELL2O00472 640 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 PPM1DO15297 605 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZC3H11AO75152 810 aaKnown RBP eCLIP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 RNF8O76064 485 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF32P17041 273 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 AMD1P17707 334 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 RXRAP19793 462 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 FPR3P25089 353 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 CTSSP25774 331 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ALDH1A3P47895 512 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 SLC8A3P57103 927 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 IRX1P78414 480 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 PHEXP78562 749 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ABATP80404 500 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 SP140Q13342 867 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 BOP1Q14137 746 aaKnown RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 TREML2Q5T2D2 321 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZCCHC8Q6NZY4 707 aaKnown RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 LMBR1LQ6UX01 489 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 C6orf15Q6UXA7 325 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 PARS2Q7L3T8 475 aaKnown RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 TRMT1LQ7Z2T5 733 aaKnown RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 MCF2L2Q86YR7 1114 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 POC1AQ8NBT0 407 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ADAD2Q8NCV1 583 aaKnown RBP-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 OR6P1Q8NGX9 317 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 FAM76AQ8TAV0 307 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 DEPTORQ8TB45 409 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 GAB3Q8WWW8 586 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ADAMTS14Q8WXS8 1223 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 OSBPL9Q96SU4 736 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 VGLL1Q99990 258 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 PIMREGQ9BSJ6 248 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 SCNM1Q9BWG6 230 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 TRIM15Q9C019 465 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 KANSL2Q9H9L4 492 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 CAPN10Q9HC96 672 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 TXNRD2Q9NNW7 524 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 ARHGEF4Q9NR80 690 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 TMEM45AQ9NWC5 275 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 UTS2RQ9UKP6 389 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 CDYLQ9Y232 598 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 TCF19Q9Y242 345 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 COQ6Q9Y2Z9 468 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 PTGDR2Q9Y5Y4 395 aa-0.26□□□□□ -2.45
RNU6-542P-201ENST00000516405 CCDC195A0A1B0GUA6 201 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 A0A1B0GVT2 93 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 KLHL33A6NCF5 533 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 BTBD19C9JJ37 291 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 E7ENX8 843 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 M0R2C6 588 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 PFKMP08237 780 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 MTHFD1P11586 935 aaKnown RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 PABPC1P11940 636 aaKnown RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 FPR1P21462 350 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 CLK1P49759 484 aaKnown RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 KIF11P52732 1056 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 GPSM2P81274 684 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 MRPS5P82675 430 aaKnown RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 SP2Q02086 613 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 GUCY1A3Q02108 690 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 TAP2Q03519 686 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 TLE4Q04727 773 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 PPIGQ13427 754 aaKnown RBP eCLIP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 SLC39A14Q15043 492 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 KRTAP13-4Q3LI77 160 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 EARS2Q5JPH6 523 aaKnown RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 L1TD1Q5T7N2 865 aaKnown RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 FOXB2Q5VYV0 432 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 TMEM64Q6YI46 380 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 Q6ZR54 194 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 Q6ZWC4 215 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 PHYKPLQ8IUZ5 450 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 CLIP4Q8N3C7 705 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 FAM109AQ8N4B1 249 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 LRRC71Q8N4P6 559 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF480Q8WV37 535 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 URB1-AS1Q96HZ7 61 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 SHDQ96IW2 340 aa-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF668Q96K58 619 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-542P-201ENST00000516405 FYTTD1Q96QD9 318 aaKnown RBP-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms