RNA–Protein interactions for RNA: ENST00000516384.1

SCARNA15.1-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 125 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.1-201ENST00000516384 FOXN3O00409 490 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 ZNF432O94892 652 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 RARBP10826 455 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 MYCLP12524 364 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PPIFP30405 207 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PGGT1BP53609 377 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 GAS1P54826 345 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 BOP1Q14137 746 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PRTGQ2VWP7 1150 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 ZNF750Q32MQ0 723 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 SLC9C1Q4G0N8 1177 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 TMTC4Q5T4D3 741 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 USP37Q86T82 979 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 FBXL14Q8N1E6 418 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 ARHGAP39Q9C0H5 1083 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 TMEM8AQ9HCN3 771 aa3.43□□□□□ -1.86
SCARNA15.1-201ENST00000516384 M0QYG6 137 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PDE8AO60658 829 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 SOCS5O75159 536 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 AGXTP21549 392 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PXNP49023 591 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 STRN3Q13033 797 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PPP4R3AQ6IN85 833 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 B4GALNT4Q76KP1 1039 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 DDX46Q7L014 1031 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 SOCS4Q8WXH5 440 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 AHCYL2Q96HN2 611 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 SLC46A1Q96NT5 459 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PTDSS2Q9BVG9 487 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 TTYH3Q9C0H2 523 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 MAPRE3Q9UPY8 281 aa3.42□□□□□ -1.86
SCARNA15.1-201ENST00000516384 AP4M1O00189 453 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 GNAI2P04899 355 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PHKG2P15735 406 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 MALP21145 153 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 IL6STP40189 918 aaPredicted RBP3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PHKA1P46020 1223 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 LOXL3P58215 753 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 E2F1Q01094 437 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 DDR1Q08345 913 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 E2F2Q14209 437 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 AWAT1Q58HT5 328 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 HIST2H2BCQ6DN03 193 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 RGS7BPQ6MZT1 257 aaPredicted RBP3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 SLC4A10Q6U841 1118 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 SPATA2LQ8IUW3 424 aaPredicted RBP3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 IQCF1Q8N6M8 205 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 FAM46DQ8NEK8 389 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 DNAJC2Q99543 621 aaKnown RBP3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 VRK1Q99986 396 aaPredicted RBP3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 ZNF277Q9NRM2 450 aaPredicted RBP3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 PLSCR4Q9NRQ2 329 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 FANCLQ9NW38 375 aa3.41□□□□□ -1.86
SCARNA15.1-201ENST00000516384 A0A087X0B3 334 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 PRSS29PA6NIE9 313 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 MT-CO3P00414 261 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 RPLP2P05387 115 aaKnown RBP3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 ATXN1LP0C7T5 689 aaKnown RBP3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 MYCLP1P12525 358 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SMARCA1P28370 1054 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 IL10RAQ13651 578 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 KEAP1Q14145 624 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 KIF22Q14807 665 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 FAM160B1Q5W0V3 765 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 TMEM65Q6PI78 240 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SFTPA1Q8IWL2 248 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 NEUROG1Q92886 237 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 C8orf37Q96NL8 207 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 MYLK2Q9H1R3 596 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 DNMT3BQ9UBC3 853 aaKnown RBP3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 MMP24Q9Y5R2 645 aa3.4□□□□□ -1.87
SCARNA15.1-201ENST00000516384 ERC2O15083 957 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 FGAP02671 866 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 CPA2P48052 419 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 PIK3CGP48736 1102 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 ENTPD1P49961 510 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SLC16A1P53985 500 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 LILRA4P59901 499 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SNAPC2Q13487 334 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 STIM1Q13586 685 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SF3B4Q15427 424 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SEC23BQ15437 767 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 KHDC1Q4VXA5 237 aaKnown RBP3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 C16orf71Q8IYS4 520 aaPredicted RBP3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 SIRT6Q8N6T7 355 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 WBP2Q969T9 261 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 DMRTA2Q96SC8 542 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 ZSWIM4Q9H7M6 989 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 AMFRQ9UKV5 643 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 MAFFQ9ULX9 164 aa3.39□□□□□ -1.87
SCARNA15.1-201ENST00000516384 NT5C1B-RDH14C9J2C7 533 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 FGF2P09038 288 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 TCEA1P23193 301 aaKnown RBP3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 CYP1B1Q16678 543 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 LONRF3Q496Y0 759 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 DEPDC1Q5TB30 811 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 RANBP10Q6VN20 620 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 ZNF793Q6ZN11 406 aa3.38□□□□□ -1.87
SCARNA15.1-201ENST00000516384 UBE2Q1Q7Z7E8 422 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms