RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 LPCAT2Q7L5N7 544 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 SYCP3Q8IZU3 236 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 KIAA1958Q8N8K9 716 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 OLIG1Q8TAK6 271 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 FAM84AQ96KN4 292 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 SPACA7Q96KW9 195 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 SYT15Q9BQS2 421 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 SCNM1Q9BWG6 230 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 TMEM121BQ9BXQ6 578 aaPredicted RBP16.85■□□□□ 0.29
LMNA-223ENST00000515459 MTMR12Q9C0I1 747 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 EHD2Q9NZN4 543 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 TBC1D7Q9P0N9 293 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 STK17AQ9UEE5 414 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 CCDC39Q9UFE4 941 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 SIX4Q9UIU6 781 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 CDH9Q9ULB4 789 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
LMNA-223ENST00000515459 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 GOLGA8IPA6NC78 632 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 ANTXRLA6NF34 631 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 GOLGA8JA6NMD2 632 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 MAP3K13O43283 966 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 TOP3BO95985 862 aaKnown RBP16.84■□□□□ 0.29
LMNA-223ENST00000515459 CYP17A1P05093 508 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 ANXA13P27216 316 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 PSMC1P62191 440 aaKnown RBP16.84■□□□□ 0.29
LMNA-223ENST00000515459 RABEP1Q15276 862 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 HSF5Q4G112 596 aaPredicted RBP16.84■□□□□ 0.29
LMNA-223ENST00000515459 TRIM61Q5EBN2 209 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 TMEM92Q6UXU6 159 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 BRAPQ7Z569 592 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 ADGRG2Q8IZP9 1017 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 ALLCQ8N6M5 410 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 DEFB124Q8NES8 71 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 WHAMMQ8TF30 809 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 NOC3LQ8WTT2 800 aaKnown RBP16.84■□□□□ 0.29
LMNA-223ENST00000515459 MYLPFQ96A32 169 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 ANKRD36BP1Q96IX9 119 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 EPSTI1Q96J88 318 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 NUSAP1Q9BXS6 441 aaKnown RBP16.84■□□□□ 0.29
LMNA-223ENST00000515459 PDE11AQ9HCR9 933 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 CRTAC1Q9NQ79 661 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 OLFML3Q9NRN5 406 aa16.84■□□□□ 0.29
LMNA-223ENST00000515459 CIZ1Q9ULV3 898 aaPredicted RBP16.84■□□□□ 0.29
LMNA-223ENST00000515459 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
LMNA-223ENST00000515459 BDNFP23560 247 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 LMO2P25791 158 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 EIF2DP41214 584 aaKnown RBP16.83■□□□□ 0.28
LMNA-223ENST00000515459 P2RY2P41231 377 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 PPP3CCP48454 512 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 USP46P62068 366 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 SLC7A9P82251 487 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 CYP27A1Q02318 531 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 LARP1BQ659C4 914 aaKnown RBP16.83■□□□□ 0.28
LMNA-223ENST00000515459 LMBRD2Q68DH5 695 aaPredicted RBP16.83■□□□□ 0.28
LMNA-223ENST00000515459 USP49Q70CQ1 688 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 SV2BQ7L1I2 683 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 SYT12Q8IV01 421 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 IL17RCQ8NAC3 791 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 TXNDC5Q8NBS9 432 aaKnown RBP16.83■□□□□ 0.28
LMNA-223ENST00000515459 KBTBD7Q8WVZ9 684 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 RLN3Q8WXF3 142 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 GATA6Q92908 595 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 HPDLQ96IR7 371 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 PNKPQ96T60 521 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 CBWD1Q9BRT8 395 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 SLC32A1Q9H598 525 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 POLMQ9NP87 494 aaPredicted RBP16.83■□□□□ 0.28
LMNA-223ENST00000515459 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 PLXND1Q9Y4D7 1925 aa16.83■□□□□ 0.28
LMNA-223ENST00000515459 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
LMNA-223ENST00000515459 ZNF840PA6NDX5 716 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 TNFRSF10BO14763 440 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 TRIM66O15016 1216 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 KAT7O95251 611 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 KLF8O95600 359 aaPredicted RBP16.82■□□□□ 0.28
LMNA-223ENST00000515459 APODP05090 189 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 HNRNPLP14866 589 aaKnown RBP eCLIP16.82■□□□□ 0.28
LMNA-223ENST00000515459 TIE1P35590 1138 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 DPP6P42658 865 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 CASP5P51878 434 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 ALCAMQ13740 583 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 DHCR24Q15392 516 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 EOGTQ5NDL2 527 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 ARMCX6Q7L4S7 300 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 LIMS2Q7Z4I7 341 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 GPD1LQ8N335 351 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 FNBP1Q96RU3 617 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 TTLL2Q9BWV7 592 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 RNF38Q9H0F5 515 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 PCIF1Q9H4Z3 704 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 INTS13Q9NVM9 706 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 BCCIPQ9P287 314 aaKnown RBP eCLIP16.82■□□□□ 0.28
LMNA-223ENST00000515459 CEP192Q8TEP8 1941 aa16.82■□□□□ 0.28
LMNA-223ENST00000515459 MYOFQ9NZM1 2061 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms